Detailed information NTG0910191

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABRU06_RS18335
• Genome accession: NZ_CP158503
• Coordinates: 3787301..3788326 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain E-ge-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3782301..3793326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABRU06_RS18315 (ABRU06_18325)	metJ	3783362..3783679 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABRU06_RS18320 (ABRU06_18330)	yiiX	3783863..3784471 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ABRU06_RS18325 (ABRU06_18335)	rpmE	3784532..3784744 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABRU06_RS18330 (ABRU06_18340)	priA	3784947..3787145 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ABRU06_RS18335 (ABRU06_18345)	cytR	3787301..3788326 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABRU06_RS18340 (ABRU06_18350)	ftsN	3788418..3789377 (+)	960	WP_000068828.1	cell division protein FtsN	-
ABRU06_RS18345 (ABRU06_18355)	hslV	3789470..3790000 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABRU06_RS18350 (ABRU06_18360)	hslU	3790010..3791341 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABRU06_RS18355 (ABRU06_18365)	menA	3791408..3792334 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABRU06_RS18360 (ABRU06_18370)	rraA	3792427..3792912 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABRU06_RS18365 (ABRU06_18375)	zapB	3792997..3793242 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=910191 ABRU06_RS18335 WP_000644904.1 3787301..3788326(+) (cytR) [Escherichia coli strain E-ge-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=910191 ABRU06_RS18335 WP_000644904.1 3787301..3788326(+) (cytR) [Escherichia coli strain E-ge-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628