Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   SD437_RS01880 Genome accession   NZ_CP139565
Coordinates   366204..366368 (+) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain NCCP     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 361204..371368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD437_RS01875 srfAB 363095..366187 (+) 3093 Protein_329 surfactin non-ribosomal peptide synthetase SrfAB -
  SD437_RS01880 comS 366204..366368 (+) 165 WP_269194677.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=910189 SD437_RS01880 WP_269194677.1 366204..366368(+) (comS) [Bacillus velezensis strain NCCP]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=910189 SD437_RS01880 WP_269194677.1 366204..366368(+) (comS) [Bacillus velezensis strain NCCP]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5