Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   SD440_RS07635 Genome accession   NZ_CP139561
Coordinates   1470727..1471308 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain NCCP     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1465727..1476308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD440_RS07610 - 1466392..1467570 (+) 1179 WP_051005660.1 N-acetyldiaminopimelate deacetylase -
  SD440_RS07615 - 1467621..1467863 (+) 243 WP_003211408.1 YkuS family protein -
  SD440_RS07620 - 1467888..1468697 (-) 810 WP_035700594.1 mechanosensitive ion channel family protein -
  SD440_RS07625 ahpA 1468969..1469511 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  SD440_RS07630 - 1469787..1470245 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  SD440_RS07635 rok 1470727..1471308 (+) 582 WP_007498648.1 hypothetical protein Regulator
  SD440_RS07640 - 1471371..1472288 (-) 918 WP_025207264.1 hypothetical protein -
  SD440_RS07645 - 1472372..1472953 (+) 582 WP_017359414.1 molybdenum cofactor guanylyltransferase -
  SD440_RS07650 - 1472983..1473999 (+) 1017 WP_050827223.1 MoeB/ThiF family adenylyltransferase -
  SD440_RS07655 glp 1474009..1475283 (+) 1275 WP_048001602.1 gephyrin-like molybdotransferase Glp -
  SD440_RS07660 mobB 1475265..1475792 (+) 528 WP_046527034.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  SD440_RS07665 - 1475785..1476276 (+) 492 WP_008345161.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=910144 SD440_RS07635 WP_007498648.1 1470727..1471308(+) (rok) [Bacillus altitudinis strain NCCP]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=910144 SD440_RS07635 WP_007498648.1 1470727..1471308(+) (rok) [Bacillus altitudinis strain NCCP]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAACTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGTGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782