Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SD440_RS06275 Genome accession   NZ_CP139561
Coordinates   1230474..1231139 (+) Length   221 a.a.
NCBI ID   WP_008348474.1    Uniprot ID   A0A9X0KA21
Organism   Bacillus altitudinis strain NCCP     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1225474..1236139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD440_RS06245 - 1226211..1227128 (+) 918 WP_007499016.1 ATP-binding cassette domain-containing protein -
  SD440_RS06250 - 1227324..1227809 (+) 486 WP_041092069.1 diadenosine tetraphosphate hydrolase -
  SD440_RS06255 - 1227911..1228198 (+) 288 WP_336749597.1 hypothetical protein -
  SD440_RS06260 - 1228336..1228914 (+) 579 WP_024720065.1 GNAT family N-acetyltransferase -
  SD440_RS06265 spxA 1229108..1229503 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  SD440_RS06270 - 1229544..1230209 (-) 666 WP_007499010.1 TerC family protein -
  SD440_RS06275 mecA 1230474..1231139 (+) 666 WP_008348474.1 adaptor protein MecA Regulator
  SD440_RS06280 cls 1231225..1232745 (+) 1521 WP_008348473.1 cardiolipin synthase -
  SD440_RS06285 - 1232805..1234067 (+) 1263 WP_345912208.1 competence protein CoiA family protein -
  SD440_RS06290 pepF 1234282..1236108 (+) 1827 WP_282900478.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26471.24 Da        Isoelectric Point: 4.0153

>NTDB_id=910139 SD440_RS06275 WP_008348474.1 1230474..1231139(+) (mecA) [Bacillus altitudinis strain NCCP]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFHKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLQEYGQLIVKENALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=910139 SD440_RS06275 WP_008348474.1 1230474..1231139(+) (mecA) [Bacillus altitudinis strain NCCP]
ATGGAAATCGAAAGAATAAATGAACATACAGTCAAATTTTATATTTCCTACGGTGATATTGAAGATCGCGGTTTTGACCG
TGAAGAGATTTGGTATAATCGTGAGCGCAGTGAAGAGCTGTTCTGGGAAGTGATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTAGAGGGACCACTTTGGATTCAAGTACAGGCACTTGATAAAGGTCTTGAAATTGTCGTGACAAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTTTAGATGCTCT
GCTTGATGATTTTCATAAAGAAGAGCAAGATCAAGAAGATCATAATGAGAAGGACAAAAAACTTCAACTTCAGTTCGTAT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACGACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAGGTGGAGAATAAGCTTAGTATTCTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATCTACAGACTGCAAGAATACGGTCAGCTGATTGTCAAAGAGAATGCGCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

76.923

100

0.769