Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   SD440_RS05755 Genome accession   NZ_CP139561
Coordinates   1119641..1120591 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain NCCP     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1114641..1125591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SD440_RS05735 - 1115877..1116359 (+) 483 WP_046343108.1 hypothetical protein -
  SD440_RS05740 - 1116390..1117829 (-) 1440 WP_345912192.1 PLP-dependent aminotransferase family protein -
  SD440_RS05745 - 1117973..1119142 (+) 1170 WP_046526638.1 MFS transporter -
  SD440_RS05750 - 1119205..1119483 (+) 279 WP_017366963.1 barstar family protein -
  SD440_RS05755 ceuB 1119641..1120591 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  SD440_RS05760 - 1120584..1121534 (+) 951 WP_057079733.1 iron chelate uptake ABC transporter family permease subunit -
  SD440_RS05765 - 1121525..1122283 (+) 759 WP_345912193.1 ATP-binding cassette domain-containing protein -
  SD440_RS05770 - 1122306..1123250 (+) 945 WP_345912194.1 siderophore ABC transporter substrate-binding protein -
  SD440_RS05775 - 1123588..1124544 (+) 957 WP_007499147.1 LCP family protein -
  SD440_RS05780 - 1124580..1125014 (-) 435 WP_035700181.1 hypothetical protein -
  SD440_RS05785 - 1125100..1125462 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=910132 SD440_RS05755 WP_017366964.1 1119641..1120591(+) (ceuB) [Bacillus altitudinis strain NCCP]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=910132 SD440_RS05755 WP_017366964.1 1119641..1120591(+) (ceuB) [Bacillus altitudinis strain NCCP]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACATCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTTGGCTTGATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGATGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATTATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494