Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   SNE23_RS05850 Genome accession   NZ_CP139483
Coordinates   1125932..1126108 (+) Length   58 a.a.
NCBI ID   WP_048527481.1    Uniprot ID   A0A1J9TAF2
Organism   Bacillus sp. RA(2023)     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1120932..1131108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SNE23_RS05830 (SNE23_05830) clpC 1121268..1123868 (+) 2601 WP_048526691.1 ATP-dependent chaperone ClpB Regulator
  SNE23_RS05835 (SNE23_05835) - 1123903..1124085 (-) 183 WP_001211116.1 YjzD family protein -
  SNE23_RS05840 (SNE23_05840) - 1124242..1124976 (+) 735 WP_048526692.1 hydrolase -
  SNE23_RS05845 (SNE23_05845) - 1125006..1125878 (+) 873 WP_157409466.1 NAD-dependent epimerase/dehydratase family protein -
  SNE23_RS05850 (SNE23_05850) comZ 1125932..1126108 (+) 177 WP_048527481.1 ComZ family protein Regulator
  SNE23_RS05855 (SNE23_05855) fabH 1126352..1127284 (+) 933 WP_157409467.1 beta-ketoacyl-ACP synthase III -
  SNE23_RS05860 (SNE23_05860) fabF 1127316..1128554 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  SNE23_RS05865 (SNE23_05865) - 1128661..1129449 (+) 789 WP_048526693.1 DUF2268 domain-containing protein -
  SNE23_RS05870 (SNE23_05870) - 1129592..1130338 (+) 747 WP_157409468.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6590.76 Da        Isoelectric Point: 4.4963

>NTDB_id=909985 SNE23_RS05850 WP_048527481.1 1125932..1126108(+) (comZ) [Bacillus sp. RA(2023)]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKAEKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=909985 SNE23_RS05850 WP_048527481.1 1125932..1126108(+) (comZ) [Bacillus sp. RA(2023)]
ATGAATGAAAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTGGATGATAATGG
AATTGCGCTTGATATGGAAAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGAAAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9TAF2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

94.828

0.569