Detailed information
Bioinformatically predicted
Overview
| Name | vicX | Type | Regulator |
| Locus tag | SM123_RS03530 | Genome accession | NZ_CP139419 |
| Coordinates | 767681..768490 (+) | Length | 269 a.a. |
| NCBI ID | WP_049475139.1 | Uniprot ID | A0A6L6LBR7 |
| Organism | Streptococcus lingualis strain S5 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 767681..812376 | 767681..768490 | within | 0 |
Gene organization within MGE regions
Location: 767681..812376
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM123_RS03530 (SM123_03530) | vicX | 767681..768490 (+) | 810 | WP_049475139.1 | MBL fold metallo-hydrolase | Regulator |
| SM123_RS03535 (SM123_03535) | - | 768917..769468 (+) | 552 | WP_320909833.1 | hypothetical protein | - |
| SM123_RS03540 (SM123_03540) | - | 769502..769888 (+) | 387 | WP_320909834.1 | YbaN family protein | - |
| SM123_RS03545 (SM123_03545) | - | 770005..771129 (-) | 1125 | WP_320909835.1 | site-specific integrase | - |
| SM123_RS03550 (SM123_03550) | - | 771217..771522 (-) | 306 | WP_320909836.1 | hypothetical protein | - |
| SM123_RS03555 (SM123_03555) | - | 771529..771906 (-) | 378 | WP_320909837.1 | ImmA/IrrE family metallo-endopeptidase | - |
| SM123_RS03560 (SM123_03560) | - | 771903..772304 (-) | 402 | WP_320909838.1 | helix-turn-helix domain-containing protein | - |
| SM123_RS03565 (SM123_03565) | - | 772468..772692 (+) | 225 | WP_320909839.1 | DUF739 family protein | - |
| SM123_RS03570 (SM123_03570) | - | 772773..773018 (+) | 246 | WP_155169989.1 | hypothetical protein | - |
| SM123_RS03575 (SM123_03575) | - | 773011..773268 (+) | 258 | WP_320909840.1 | hypothetical protein | - |
| SM123_RS03580 (SM123_03580) | - | 773465..773782 (+) | 318 | WP_320909841.1 | hypothetical protein | - |
| SM123_RS03585 (SM123_03585) | - | 773748..774434 (+) | 687 | WP_320909842.1 | AAA family ATPase | - |
| SM123_RS03590 (SM123_03590) | - | 774554..774838 (+) | 285 | Protein_683 | DEAD/DEAH box helicase family protein | - |
| SM123_RS03595 (SM123_03595) | - | 774980..775849 (+) | 870 | WP_320909995.1 | helicase-related protein | - |
| SM123_RS03600 (SM123_03600) | - | 775856..776335 (+) | 480 | WP_320909843.1 | DUF669 domain-containing protein | - |
| SM123_RS03605 (SM123_03605) | - | 776340..777122 (+) | 783 | WP_320909844.1 | bifunctional DNA primase/polymerase | - |
| SM123_RS03610 (SM123_03610) | - | 777112..778659 (+) | 1548 | WP_320909845.1 | phage/plasmid primase, P4 family | - |
| SM123_RS03615 (SM123_03615) | - | 778919..779242 (+) | 324 | WP_320909846.1 | VRR-NUC domain-containing protein | - |
| SM123_RS03620 (SM123_03620) | - | 779235..780881 (+) | 1647 | WP_320909847.1 | SIALI-17 repeat-containing surface protein | - |
| SM123_RS03625 (SM123_03625) | - | 780881..781240 (+) | 360 | WP_320909848.1 | hypothetical protein | - |
| SM123_RS03630 (SM123_03630) | - | 781887..782396 (+) | 510 | WP_320909849.1 | MazG-like family protein | - |
| SM123_RS03635 (SM123_03635) | - | 782389..783033 (+) | 645 | WP_320909850.1 | DUF1642 domain-containing protein | - |
| SM123_RS03640 (SM123_03640) | - | 783030..783410 (+) | 381 | WP_320909851.1 | hypothetical protein | - |
| SM123_RS03645 (SM123_03645) | - | 783552..783833 (+) | 282 | WP_320909852.1 | hypothetical protein | - |
| SM123_RS03650 (SM123_03650) | - | 783938..784213 (+) | 276 | WP_320909853.1 | hypothetical protein | - |
| SM123_RS03655 (SM123_03655) | - | 784215..784463 (+) | 249 | WP_320909854.1 | hypothetical protein | - |
| SM123_RS03660 (SM123_03660) | - | 784447..784866 (+) | 420 | WP_320909855.1 | DUF1492 domain-containing protein | - |
| SM123_RS03665 (SM123_03665) | - | 785014..785352 (+) | 339 | WP_320909856.1 | HNH endonuclease | - |
| SM123_RS03670 (SM123_03670) | - | 785550..786017 (+) | 468 | WP_254729138.1 | phage terminase small subunit P27 family | - |
| SM123_RS03680 (SM123_03680) | - | 786134..787861 (+) | 1728 | WP_320909996.1 | terminase TerL endonuclease subunit | - |
| SM123_RS03685 (SM123_03685) | - | 788013..788165 (+) | 153 | WP_320909857.1 | hypothetical protein | - |
| SM123_RS03690 (SM123_03690) | - | 788196..789425 (+) | 1230 | WP_320909858.1 | phage portal protein | - |
| SM123_RS03695 (SM123_03695) | - | 789382..790062 (+) | 681 | WP_134974309.1 | head maturation protease, ClpP-related | - |
| SM123_RS03700 (SM123_03700) | - | 790084..791253 (+) | 1170 | WP_320909859.1 | phage major capsid protein | - |
| SM123_RS03705 (SM123_03705) | - | 791421..791756 (+) | 336 | WP_320909860.1 | head-tail connector protein | - |
| SM123_RS03710 (SM123_03710) | - | 791713..792069 (+) | 357 | WP_320909861.1 | head-tail adaptor protein | - |
| SM123_RS03715 (SM123_03715) | - | 792066..792443 (+) | 378 | WP_320909862.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| SM123_RS03720 (SM123_03720) | - | 792440..792889 (+) | 450 | WP_320909863.1 | hypothetical protein | - |
| SM123_RS03725 (SM123_03725) | - | 792893..793444 (+) | 552 | WP_134974319.1 | major tail protein | - |
| SM123_RS03730 (SM123_03730) | - | 793539..793877 (+) | 339 | WP_134974321.1 | hypothetical protein | - |
| SM123_RS03735 (SM123_03735) | - | 793925..794068 (+) | 144 | WP_320909864.1 | hypothetical protein | - |
| SM123_RS10270 | - | 794475..795119 (+) | 645 | Protein_712 | phage tail tape measure protein | - |
| SM123_RS03745 (SM123_03745) | - | 795290..796234 (+) | 945 | WP_320909866.1 | hypothetical protein | - |
| SM123_RS03750 (SM123_03750) | - | 796413..799691 (+) | 3279 | WP_320909867.1 | phage tail tape measure protein | - |
| SM123_RS03755 (SM123_03755) | - | 799688..800404 (+) | 717 | WP_320909868.1 | distal tail protein Dit | - |
| SM123_RS03760 (SM123_03760) | - | 800401..803499 (+) | 3099 | WP_320909869.1 | phage tail spike protein | - |
| SM123_RS03765 (SM123_03765) | - | 803516..803752 (+) | 237 | WP_320909870.1 | hypothetical protein | - |
| SM123_RS03770 (SM123_03770) | - | 803757..804377 (+) | 621 | WP_320909871.1 | hypothetical protein | - |
| SM123_RS03775 (SM123_03775) | - | 804409..804858 (+) | 450 | WP_320909872.1 | phage holin family protein | - |
| SM123_RS03780 (SM123_03780) | - | 804860..805189 (+) | 330 | WP_150905639.1 | phage holin | - |
| SM123_RS03785 (SM123_03785) | - | 805200..806045 (+) | 846 | WP_320909873.1 | lytic exoenzyme target recognition domain-containing protein | - |
| SM123_RS03790 (SM123_03790) | - | 806057..806476 (+) | 420 | WP_320909874.1 | hypothetical protein | - |
| SM123_RS03795 (SM123_03795) | - | 806488..806838 (+) | 351 | WP_320909875.1 | hypothetical protein | - |
| SM123_RS03800 (SM123_03800) | - | 806850..807734 (+) | 885 | WP_320909876.1 | hypothetical protein | - |
| SM123_RS03805 (SM123_03805) | rnc | 808148..808849 (+) | 702 | WP_070506695.1 | ribonuclease III | - |
| SM123_RS03810 (SM123_03810) | smc | 808840..812376 (+) | 3537 | WP_320909877.1 | chromosome segregation protein SMC | - |
Sequence
Protein
Download Length: 269 a.a. Molecular weight: 29722.70 Da Isoelectric Point: 5.9511
>NTDB_id=909530 SM123_RS03530 WP_049475139.1 767681..768490(+) (vicX) [Streptococcus lingualis strain S5]
MTEEGFKYSILASGSSGNSFYLETPKKKLLIDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEATWKAMEGTKYLGKVDDAQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRLMKDGKSFVMLTDTGYVSDRLAG
IVADADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMEN
QLARADLAVGHDFEVLDTSPDTATPLTKI
MTEEGFKYSILASGSSGNSFYLETPKKKLLIDAGLSGKKITGLLAEIDRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEATWKAMEGTKYLGKVDDAQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRLMKDGKSFVMLTDTGYVSDRLAG
IVADADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMEN
QLARADLAVGHDFEVLDTSPDTATPLTKI
Nucleotide
Download Length: 810 bp
>NTDB_id=909530 SM123_RS03530 WP_049475139.1 767681..768490(+) (vicX) [Streptococcus lingualis strain S5]
ATGACAGAAGAGGGATTTAAGTACAGTATTTTAGCTTCAGGTTCTAGTGGAAATTCTTTCTACCTTGAGACACCAAAGAA
AAAACTGCTTATTGATGCAGGGCTCTCAGGGAAAAAGATTACGGGACTATTGGCTGAAATTGATCGCAAACCAGAAGATT
TAGATGCCATTCTGATTACGCACGAACACTCAGACCATATCCATGGTGTGGGTGTTTTAGCGCGGAAATATGGGATGGAT
CTATATGCTAATGAAGCCACTTGGAAGGCTATGGAAGGTACCAAGTATCTAGGAAAGGTCGATGATGCTCAAAAGCATAT
CTTTGAAATGGGGAAGACCAAAACATTTGGCGATATCGATATCGAAAGTTTTGGGGTCAGTCACGATGCTGCAGCCCCTC
AATTCTATCGCTTGATGAAGGATGGGAAGAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGATCGCTTAGCAGGA
ATCGTCGCGGATGCGGATGGCTATCTAATTGAGTCCAACCATGATGTAGAAATTCTTCGAGCAGGTTCGTATGCTTGGCG
TTTGAAGCAACGGATCTTGTCTGATCTGGGTCACCTTTCTAATGAAGATGGGGCAGATGCCATGATCCGGACCTTGGGAA
ATCGTACCAAGAAGATTTATCTGGGGCATTTGTCAAAAGAGAACAATATCAAAGAATTAGCCCATATGACCATGGAGAAC
CAACTGGCCAGAGCAGATCTAGCAGTCGGTCATGATTTTGAGGTGCTGGATACCTCACCAGACACCGCGACCCCTTTGAC
GAAGATATAA
ATGACAGAAGAGGGATTTAAGTACAGTATTTTAGCTTCAGGTTCTAGTGGAAATTCTTTCTACCTTGAGACACCAAAGAA
AAAACTGCTTATTGATGCAGGGCTCTCAGGGAAAAAGATTACGGGACTATTGGCTGAAATTGATCGCAAACCAGAAGATT
TAGATGCCATTCTGATTACGCACGAACACTCAGACCATATCCATGGTGTGGGTGTTTTAGCGCGGAAATATGGGATGGAT
CTATATGCTAATGAAGCCACTTGGAAGGCTATGGAAGGTACCAAGTATCTAGGAAAGGTCGATGATGCTCAAAAGCATAT
CTTTGAAATGGGGAAGACCAAAACATTTGGCGATATCGATATCGAAAGTTTTGGGGTCAGTCACGATGCTGCAGCCCCTC
AATTCTATCGCTTGATGAAGGATGGGAAGAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGATCGCTTAGCAGGA
ATCGTCGCGGATGCGGATGGCTATCTAATTGAGTCCAACCATGATGTAGAAATTCTTCGAGCAGGTTCGTATGCTTGGCG
TTTGAAGCAACGGATCTTGTCTGATCTGGGTCACCTTTCTAATGAAGATGGGGCAGATGCCATGATCCGGACCTTGGGAA
ATCGTACCAAGAAGATTTATCTGGGGCATTTGTCAAAAGAGAACAATATCAAAGAATTAGCCCATATGACCATGGAGAAC
CAACTGGCCAGAGCAGATCTAGCAGTCGGTCATGATTTTGAGGTGCTGGATACCTCACCAGACACCGCGACCCCTTTGAC
GAAGATATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| vicX | Streptococcus mutans UA159 |
78.439 |
100 |
0.784 |