Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | SM123_RS01455 | Genome accession | NZ_CP139419 |
| Coordinates | 284808..287237 (+) | Length | 809 a.a. |
| NCBI ID | WP_049485777.1 | Uniprot ID | A0A6I3PDV9 |
| Organism | Streptococcus lingualis strain S5 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 279808..292237
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM123_RS01445 (SM123_01445) | - | 280258..283968 (+) | 3711 | WP_320909659.1 | alpha-L-fucosidase | - |
| SM123_RS01450 (SM123_01450) | - | 284343..284807 (+) | 465 | WP_003002068.1 | CtsR family transcriptional regulator | - |
| SM123_RS01455 (SM123_01455) | clpC | 284808..287237 (+) | 2430 | WP_049485777.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SM123_RS01460 (SM123_01460) | - | 287247..287735 (+) | 489 | WP_118096111.1 | ECF transporter S component | - |
| SM123_RS01465 (SM123_01465) | - | 287713..288120 (+) | 408 | WP_070587783.1 | DUF4430 domain-containing protein | - |
| SM123_RS01470 (SM123_01470) | - | 288440..289165 (+) | 726 | WP_320909660.1 | hypothetical protein | - |
| SM123_RS01475 (SM123_01475) | - | 289330..290391 (+) | 1062 | WP_320909661.1 | AAA family ATPase | - |
| SM123_RS01480 (SM123_01480) | pnuC | 290402..291184 (+) | 783 | WP_320909662.1 | nicotinamide riboside transporter PnuC | - |
| SM123_RS01485 (SM123_01485) | - | 291185..291961 (+) | 777 | WP_320909663.1 | NUDIX hydrolase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89684.17 Da Isoelectric Point: 5.4184
>NTDB_id=909519 SM123_RS01455 WP_049485777.1 284808..287237(+) (clpC) [Streptococcus lingualis strain S5]
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=909519 SM123_RS01455 WP_049485777.1 284808..287237(+) (clpC) [Streptococcus lingualis strain S5]
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCGGCGGAGCATATTACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAGCACGCAAGAGAGATTGCCCAGGTCCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTAGCGAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCTCTTCGAAAGAATCTTGAGGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTCTATCGCGCCCAAAACCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACAGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATTGGTCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGAAAA
ACAGCCCTTGCCTTAGGTCTGGCCCAGCGTGTCGCTAGTGGCAATGTACCAGCTGAAATCGCGCAGATGCGTGTTCTGGA
ATTGGATCTCATGAATGTCGTTGCTGGGACGCGCTTCCGTGGGGACTTCGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACTATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGGGGAACCTTGCGTACAGTTGGGGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACTTATCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACTAGTCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCCGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCATAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCTATTCGACGCAATCAATCGGGGA
TCCGTAGCAACAAGCGTCCGATCGGTTCTTTCATGTTCTTAGGACCTACCGGTGTCGGAAAAACAGAGCTAGCCAAAGCT
TTGGCGGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTATATGGAAAAATTCGCAGCGAG
CCGCCTCAACGGTGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCGT
ATTCGGTCCTCTTATTTGATGAGGTGGAAAAAGCCCATCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGTAAAGGCCGGAAGATTGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCAACAGC
CCTTCGGGATGATAAGACAGTTGGCTTTGGTGCCAAAGATATCCGCTTTGATCAAGCTAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTATTCCATAGCCTATCCAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGGTATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAACTAGCAGAGCTATTGCTGAAAGGCCAAGCCCAAGAAGGACAAACGATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTTGAGATTGTCTAG
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCGGCGGAGCATATTACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAGCACGCAAGAGAGATTGCCCAGGTCCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTAGCGAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCTCTTCGAAAGAATCTTGAGGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTCTATCGCGCCCAAAACCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACAGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATTGGTCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGAAAA
ACAGCCCTTGCCTTAGGTCTGGCCCAGCGTGTCGCTAGTGGCAATGTACCAGCTGAAATCGCGCAGATGCGTGTTCTGGA
ATTGGATCTCATGAATGTCGTTGCTGGGACGCGCTTCCGTGGGGACTTCGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACTATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGGGGAACCTTGCGTACAGTTGGGGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACTTATCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACTAGTCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAACGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCCGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCATAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCTATTCGACGCAATCAATCGGGGA
TCCGTAGCAACAAGCGTCCGATCGGTTCTTTCATGTTCTTAGGACCTACCGGTGTCGGAAAAACAGAGCTAGCCAAAGCT
TTGGCGGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTATATGGAAAAATTCGCAGCGAG
CCGCCTCAACGGTGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCGT
ATTCGGTCCTCTTATTTGATGAGGTGGAAAAAGCCCATCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGTAAAGGCCGGAAGATTGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCAACAGC
CCTTCGGGATGATAAGACAGTTGGCTTTGGTGCCAAAGATATCCGCTTTGATCAAGCTAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTATTCCATAGCCTATCCAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGGTATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAACTAGCAGAGCTATTGCTGAAAGGCCAAGCCCAAGAAGGACAAACGATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTTGAGATTGTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus pneumoniae Rx1 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus pneumoniae D39 |
76.942 |
100 |
0.771 |
| clpC | Streptococcus mutans UA159 |
66.218 |
100 |
0.669 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.742 |
100 |
0.651 |
| clpC | Streptococcus thermophilus LMD-9 |
64.742 |
100 |
0.651 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.601 |
100 |
0.52 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.238 |
98.64 |
0.446 |
| clpE | Streptococcus mutans UA159 |
47.687 |
77.503 |
0.37 |
| clpE | Streptococcus pneumoniae Rx1 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
45.763 |
80.222 |
0.367 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.763 |
80.222 |
0.367 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.625 |
79.11 |
0.361 |