Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | SM121_RS08880 | Genome accession | NZ_CP139418 |
| Coordinates | 1818438..1820696 (+) | Length | 752 a.a. |
| NCBI ID | WP_320910878.1 | Uniprot ID | - |
| Organism | Streptococcus dentalis strain S1 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1813438..1825696
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM121_RS08855 (SM121_08855) | - | 1813762..1815216 (-) | 1455 | WP_003011892.1 | glycoside hydrolase family 32 protein | - |
| SM121_RS08860 (SM121_08860) | - | 1815226..1816101 (-) | 876 | WP_003011660.1 | NAD(P)H-hydrate dehydratase | - |
| SM121_RS08865 (SM121_08865) | - | 1816152..1816925 (-) | 774 | WP_003012261.1 | HAD-IIB family hydrolase | - |
| SM121_RS08870 (SM121_08870) | - | 1816939..1817793 (-) | 855 | WP_003012104.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| SM121_RS08875 (SM121_08875) | - | 1817959..1818189 (-) | 231 | WP_003011913.1 | DUF1797 family protein | - |
| SM121_RS08880 (SM121_08880) | clpE | 1818438..1820696 (+) | 2259 | WP_320910878.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SM121_RS08885 (SM121_08885) | - | 1820807..1821256 (+) | 450 | WP_155125506.1 | NUDIX hydrolase | - |
| SM121_RS08890 (SM121_08890) | - | 1821324..1821626 (+) | 303 | WP_003012157.1 | DUF1827 family protein | - |
| SM121_RS08895 (SM121_08895) | ileS | 1821729..1824521 (-) | 2793 | WP_320910879.1 | isoleucine--tRNA ligase | - |
| SM121_RS08900 (SM121_08900) | - | 1824775..1825602 (-) | 828 | WP_155125502.1 | DivIVA domain-containing protein | - |
Sequence
Protein
Download Length: 752 a.a. Molecular weight: 83864.02 Da Isoelectric Point: 5.1672
>NTDB_id=909506 SM121_RS08880 WP_320910878.1 1818438..1820696(+) (clpE) [Streptococcus dentalis strain S1]
MLCQNCKINESTIHLYTNVNGRQQQVDLCQNCYKIMKTDPNNSFLKGMTQRSQLTGDPFEDFFNNLGNFQSPQEPQTPPT
QPGGSYGGGGYGQNNNRGDGQEPRQARPQKPKGLLEEFGINVTEIARKGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIG
EPGVGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQREDVILFIDEIHEIVGAG
SAGEGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVHYTD
GAIEAAAILSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYK
EMQGQHITDQETPVISEKTIEHIVEQKTNIPVGDLKEKEQSQLINLASDLKAHVIGQDDAVDKIAKAIRRNRVGLGSPNR
PIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLVLL
DEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKAEANVGFGAAREGRTNSVLGELGNFFSPEFMN
RFDGIIEFQPLSKENLLQIVTLMLDEVNQRLAQNEIHLDVTEKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDYYLE
HPSEKQLKAAMTSNGNISIKAVHKTAEKKSES
MLCQNCKINESTIHLYTNVNGRQQQVDLCQNCYKIMKTDPNNSFLKGMTQRSQLTGDPFEDFFNNLGNFQSPQEPQTPPT
QPGGSYGGGGYGQNNNRGDGQEPRQARPQKPKGLLEEFGINVTEIARKGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIG
EPGVGKTAVVEGLAQKIVDGDVPHKLQGKEVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQREDVILFIDEIHEIVGAG
SAGEGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILKGIQKKYEDYHHVHYTD
GAIEAAAILSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYK
EMQGQHITDQETPVISEKTIEHIVEQKTNIPVGDLKEKEQSQLINLASDLKAHVIGQDDAVDKIAKAIRRNRVGLGSPNR
PIGSFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLVLL
DEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKAEANVGFGAAREGRTNSVLGELGNFFSPEFMN
RFDGIIEFQPLSKENLLQIVTLMLDEVNQRLAQNEIHLDVTEKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDYYLE
HPSEKQLKAAMTSNGNISIKAVHKTAEKKSES
Nucleotide
Download Length: 2259 bp
>NTDB_id=909506 SM121_RS08880 WP_320910878.1 1818438..1820696(+) (clpE) [Streptococcus dentalis strain S1]
ATGCTTTGTCAAAATTGTAAAATAAATGAATCAACCATCCATTTATATACAAATGTAAATGGACGTCAGCAGCAAGTAGA
CCTCTGTCAAAATTGCTATAAAATTATGAAAACAGACCCAAATAACAGCTTCTTGAAAGGCATGACCCAACGGAGTCAAC
TCACTGGAGATCCTTTTGAAGATTTCTTCAATAACCTTGGAAACTTCCAAAGTCCGCAAGAACCTCAAACCCCTCCAACT
CAACCCGGAGGCAGTTATGGAGGTGGTGGCTACGGTCAAAACAATAACCGTGGCGACGGTCAAGAGCCTCGTCAAGCACG
CCCTCAAAAGCCAAAAGGACTGTTAGAGGAGTTCGGCATCAATGTTACAGAAATTGCCCGCAAAGGGGATATTGACCCTG
TCATTGGCCGTGACGAGGAGATTATCCGTGTCATCGAAATTCTCAACCGTCGAACCAAGAACAACCCGGTTCTGATTGGA
GAGCCTGGGGTCGGAAAAACTGCCGTTGTGGAAGGCCTGGCTCAAAAAATCGTCGATGGCGACGTTCCTCATAAATTGCA
AGGAAAAGAAGTCATCCGCCTAGACGTTGTGAGCCTCGTTCAGGGTACAGGCATCCGTGGTCAATTCGAAGAACGCATGC
AAAAATTAATGGATGAAATTCGTCAACGCGAAGATGTTATCCTGTTCATCGACGAAATCCATGAAATTGTTGGTGCAGGA
TCTGCTGGTGAGGGCAATATGGACGCTGGAAATATCCTCAAACCAGCCTTGGCGCGCGGTGAACTCCAATTAGTTGGGGC
TACTACCCTCAATGAATACCGTATCATTGAAAAAGATGCGGCCTTGGAACGTCGGATGCAGCCCGTTAAGGTCGATGAGC
CAACGGTTGAAGAAACCATCACCATCCTCAAGGGCATCCAGAAAAAATACGAAGACTACCACCACGTCCACTATACAGAC
GGGGCCATCGAAGCGGCAGCTATTCTGTCAAACCGTTACATCCAAGATCGCTTCCTGCCAGACAAGGCCATTGATCTGTT
GGATGAAGCGGGATCTAAGATGAACCTGACCCTAAACTTTGTGGATCCAAAAGTGATCGACCAGCGCTTGATTGAAGCTG
AAAACCTCAAAGCCCAAGCGACGCGCGAAGAAGACTTTGAAAAAGCAGCCTACTTCCGCGATCAAATCGCGAAATACAAG
GAAATGCAAGGTCAACATATCACCGATCAAGAGACCCCTGTCATCAGTGAAAAAACTATTGAACACATCGTTGAACAAAA
GACCAATATTCCTGTTGGCGATTTGAAAGAAAAAGAACAGTCTCAATTGATCAATCTGGCTTCTGATTTGAAAGCTCATG
TGATTGGTCAAGACGATGCAGTAGATAAAATCGCGAAAGCCATTCGACGCAATCGTGTCGGCTTAGGATCGCCTAACCGT
CCAATCGGAAGCTTCCTCTTTGTCGGACCAACTGGTGTCGGAAAGACCGAGTTGTCTAAACAATTAGCGATCGAGCTCTT
TGGCTCTGCAGACAATATGATCCGCTTTGATATGAGCGAATACATGGAAAAACATAGCGTAGCGAAACTAGTCGGAGCTC
CTCCGGGCTATGTTGGCTACGATGAAGCTGGACAACTAACGGAAAAGGTTCGTCGCAATCCTTACTCCCTCGTGTTATTG
GATGAAGTGGAAAAAGCCCATCCAGATGTCATGCACATGTTCTTGCAAGTCTTGGATGATGGCCGTTTGACAGATGGTCA
AGGCCGTACCGTCAGCTTCAAAGATACCATTATCATCATGACCTCTAACGCTGGAACTGGCAAAGCTGAGGCCAATGTTG
GTTTTGGAGCTGCTCGCGAAGGTCGAACCAACTCTGTACTTGGAGAACTCGGTAACTTCTTTAGCCCTGAATTCATGAAC
CGTTTTGATGGCATCATTGAATTCCAACCTCTATCAAAAGAAAACCTTCTCCAAATCGTTACCCTCATGCTGGATGAAGT
CAATCAACGTCTCGCACAAAATGAGATTCATCTGGATGTGACAGAGAAGGTCAAAGAAAAATTGGTCGATCTGGGTTACG
ATCCAAAAATGGGGGCCCGCCCACTCCGTCGTACCATCCAAGACCATATCGAAGATGCCATTACCGATTATTACCTGGAA
CATCCAAGTGAGAAACAACTCAAAGCCGCCATGACCAGCAATGGGAATATTAGCATCAAAGCTGTTCACAAGACGGCTGA
AAAGAAGTCAGAATCATAA
ATGCTTTGTCAAAATTGTAAAATAAATGAATCAACCATCCATTTATATACAAATGTAAATGGACGTCAGCAGCAAGTAGA
CCTCTGTCAAAATTGCTATAAAATTATGAAAACAGACCCAAATAACAGCTTCTTGAAAGGCATGACCCAACGGAGTCAAC
TCACTGGAGATCCTTTTGAAGATTTCTTCAATAACCTTGGAAACTTCCAAAGTCCGCAAGAACCTCAAACCCCTCCAACT
CAACCCGGAGGCAGTTATGGAGGTGGTGGCTACGGTCAAAACAATAACCGTGGCGACGGTCAAGAGCCTCGTCAAGCACG
CCCTCAAAAGCCAAAAGGACTGTTAGAGGAGTTCGGCATCAATGTTACAGAAATTGCCCGCAAAGGGGATATTGACCCTG
TCATTGGCCGTGACGAGGAGATTATCCGTGTCATCGAAATTCTCAACCGTCGAACCAAGAACAACCCGGTTCTGATTGGA
GAGCCTGGGGTCGGAAAAACTGCCGTTGTGGAAGGCCTGGCTCAAAAAATCGTCGATGGCGACGTTCCTCATAAATTGCA
AGGAAAAGAAGTCATCCGCCTAGACGTTGTGAGCCTCGTTCAGGGTACAGGCATCCGTGGTCAATTCGAAGAACGCATGC
AAAAATTAATGGATGAAATTCGTCAACGCGAAGATGTTATCCTGTTCATCGACGAAATCCATGAAATTGTTGGTGCAGGA
TCTGCTGGTGAGGGCAATATGGACGCTGGAAATATCCTCAAACCAGCCTTGGCGCGCGGTGAACTCCAATTAGTTGGGGC
TACTACCCTCAATGAATACCGTATCATTGAAAAAGATGCGGCCTTGGAACGTCGGATGCAGCCCGTTAAGGTCGATGAGC
CAACGGTTGAAGAAACCATCACCATCCTCAAGGGCATCCAGAAAAAATACGAAGACTACCACCACGTCCACTATACAGAC
GGGGCCATCGAAGCGGCAGCTATTCTGTCAAACCGTTACATCCAAGATCGCTTCCTGCCAGACAAGGCCATTGATCTGTT
GGATGAAGCGGGATCTAAGATGAACCTGACCCTAAACTTTGTGGATCCAAAAGTGATCGACCAGCGCTTGATTGAAGCTG
AAAACCTCAAAGCCCAAGCGACGCGCGAAGAAGACTTTGAAAAAGCAGCCTACTTCCGCGATCAAATCGCGAAATACAAG
GAAATGCAAGGTCAACATATCACCGATCAAGAGACCCCTGTCATCAGTGAAAAAACTATTGAACACATCGTTGAACAAAA
GACCAATATTCCTGTTGGCGATTTGAAAGAAAAAGAACAGTCTCAATTGATCAATCTGGCTTCTGATTTGAAAGCTCATG
TGATTGGTCAAGACGATGCAGTAGATAAAATCGCGAAAGCCATTCGACGCAATCGTGTCGGCTTAGGATCGCCTAACCGT
CCAATCGGAAGCTTCCTCTTTGTCGGACCAACTGGTGTCGGAAAGACCGAGTTGTCTAAACAATTAGCGATCGAGCTCTT
TGGCTCTGCAGACAATATGATCCGCTTTGATATGAGCGAATACATGGAAAAACATAGCGTAGCGAAACTAGTCGGAGCTC
CTCCGGGCTATGTTGGCTACGATGAAGCTGGACAACTAACGGAAAAGGTTCGTCGCAATCCTTACTCCCTCGTGTTATTG
GATGAAGTGGAAAAAGCCCATCCAGATGTCATGCACATGTTCTTGCAAGTCTTGGATGATGGCCGTTTGACAGATGGTCA
AGGCCGTACCGTCAGCTTCAAAGATACCATTATCATCATGACCTCTAACGCTGGAACTGGCAAAGCTGAGGCCAATGTTG
GTTTTGGAGCTGCTCGCGAAGGTCGAACCAACTCTGTACTTGGAGAACTCGGTAACTTCTTTAGCCCTGAATTCATGAAC
CGTTTTGATGGCATCATTGAATTCCAACCTCTATCAAAAGAAAACCTTCTCCAAATCGTTACCCTCATGCTGGATGAAGT
CAATCAACGTCTCGCACAAAATGAGATTCATCTGGATGTGACAGAGAAGGTCAAAGAAAAATTGGTCGATCTGGGTTACG
ATCCAAAAATGGGGGCCCGCCCACTCCGTCGTACCATCCAAGACCATATCGAAGATGCCATTACCGATTATTACCTGGAA
CATCCAAGTGAGAAACAACTCAAAGCCGCCATGACCAGCAATGGGAATATTAGCATCAAAGCTGTTCACAAGACGGCTGA
AAAGAAGTCAGAATCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
86.968 |
100 |
0.87 |
| clpE | Streptococcus pneumoniae D39 |
86.968 |
100 |
0.87 |
| clpE | Streptococcus pneumoniae R6 |
86.968 |
100 |
0.87 |
| clpE | Streptococcus pneumoniae TIGR4 |
86.968 |
100 |
0.87 |
| clpE | Streptococcus mutans UA159 |
84.112 |
99.601 |
0.838 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
75.429 |
100 |
0.759 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.546 |
90.293 |
0.465 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.546 |
86.702 |
0.412 |
| clpC | Streptococcus pneumoniae Rx1 |
47.84 |
83.112 |
0.398 |
| clpC | Streptococcus pneumoniae D39 |
47.84 |
83.112 |
0.398 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.68 |
83.112 |
0.396 |
| clpC | Streptococcus mutans UA159 |
46.88 |
83.112 |
0.39 |
| clpC | Streptococcus thermophilus LMD-9 |
47.03 |
82.846 |
0.39 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.785 |
82.713 |
0.387 |