Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | SM121_RS02820 | Genome accession | NZ_CP139418 |
| Coordinates | 558824..561253 (+) | Length | 809 a.a. |
| NCBI ID | WP_320911104.1 | Uniprot ID | - |
| Organism | Streptococcus dentalis strain S1 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 553824..566253
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SM121_RS09720 | - | 554775..555323 (+) | 549 | WP_407073055.1 | G5 domain-containing protein | - |
| SM121_RS02810 (SM121_02810) | - | 555427..557886 (+) | 2460 | Protein_511 | alpha-L-fucosidase | - |
| SM121_RS02815 (SM121_02815) | - | 558359..558823 (+) | 465 | WP_320911103.1 | CtsR family transcriptional regulator | - |
| SM121_RS02820 (SM121_02820) | clpC | 558824..561253 (+) | 2430 | WP_320911104.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SM121_RS02825 (SM121_02825) | - | 561263..561751 (+) | 489 | WP_155172714.1 | ECF transporter S component | - |
| SM121_RS02830 (SM121_02830) | - | 561729..562136 (+) | 408 | WP_155172713.1 | DUF4430 domain-containing protein | - |
| SM121_RS02835 (SM121_02835) | - | 562304..563020 (+) | 717 | WP_320911105.1 | hypothetical protein | - |
| SM121_RS02840 (SM121_02840) | - | 563195..564256 (+) | 1062 | WP_003012910.1 | AAA family ATPase | - |
| SM121_RS02845 (SM121_02845) | pnuC | 564267..565049 (+) | 783 | WP_320911106.1 | nicotinamide riboside transporter PnuC | - |
| SM121_RS02850 (SM121_02850) | - | 565050..565826 (+) | 777 | WP_320911107.1 | NUDIX domain-containing protein | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89663.10 Da Isoelectric Point: 5.3476
>NTDB_id=909481 SM121_RS02820 WP_320911104.1 558824..561253(+) (clpC) [Streptococcus dentalis strain S1]
MNYSTALLESIEAAQILAGHYQGNTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRAASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKATQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
MNYSTALLESIEAAQILAGHYQGNTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQLEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRAASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKATQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQGMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=909481 SM121_RS02820 WP_320911104.1 558824..561253(+) (clpC) [Streptococcus dentalis strain S1]
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGGCACTATCAGGGGAACACCTTAGA
TACTTGGCATCTCTTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAGCACGCAAGGGAGATTGCCCAGGTTCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTAGCGAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCTCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGCCTTTATCGGGCCCAAAATCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACGGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATTGGTCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAGGCAGGGGTCGGAAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGGGCCGCTAGTGGCAATGTTCCAGCTGAAATCGCACAGATGCGTGTTCTTGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGGGACTTTGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACCATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGAGGAACCTTGCGTACAGTTGGAGCAACGACACAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTTTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACCTACCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACTGTACAAAACCGAGATTCCAATGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAACCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCTGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCACAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCAAGTATCAGTCGGGCTATTCGACGCAATCAATCAGGTA
TCCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAGTTAGCCAAAGCT
TTGGCGGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCCAG
TCGCCTCAACGGAGCTCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCACCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATTGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCAACAGC
CCTTCGGGATGATAAGACCGTTGGCTTTGGTGCCAAAGATATTCGCTTTGACCAAGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCTGAACAAGGCATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGGTACGATCCAGAAATGGGAGCTCGCCCACTCCGTCGTGTCTTGCAGA
CCGAAGTGGAGGATCAACTAGCAGAGCTATTGCTGAAAGGGCAAGCCCAAGAAGGGCAAACGATCAAGGTTGGAACGACA
GCTGGAACGATCAAGTTTGAGATTGTCTAG
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGGCACTATCAGGGGAACACCTTAGA
TACTTGGCATCTCTTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGCCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCCATTATGAAGCACGCAAGGGAGATTGCCCAGGTTCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTAGCGAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCTCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGCCTTTATCGGGCCCAAAATCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACGGAAATGGCGCGTGCAGGCCAGCTTGAGCCTGTGATTGGTCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAGGCAGGGGTCGGAAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGGGCCGCTAGTGGCAATGTTCCAGCTGAAATCGCACAGATGCGTGTTCTTGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGGGACTTTGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACCATTATGGGGTCAGGATCCGGTATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCCTGGCACGAGGAACCTTGCGTACAGTTGGAGCAACGACACAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTTTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACCTACCAGGACCACCATCATGTGACCATTACCGATGAAGCGATCGAAACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACTGTACAAAACCGAGATTCCAATGGTCACGTAAAAGAAGAGTTGACCGCCTTGGATCGGGCCTTGATGGATGGCAAGT
GGAAGAAAGCAACCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCTGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCACAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCAAGTATCAGTCGGGCTATTCGACGCAATCAATCAGGTA
TCCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAGTTAGCCAAAGCT
TTGGCGGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTCGCGGCCAG
TCGCCTCAACGGAGCTCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAGTTGACCGAGAAAGTCCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCACCCAGATATTTTCAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATTGACTTCTCCAATACCATTATCATCATGACCTCAAACCTGGGAGCAACAGC
CCTTCGGGATGATAAGACCGTTGGCTTTGGTGCCAAAGATATTCGCTTTGACCAAGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCTGAACAAGGCATGACCCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGGTACGATCCAGAAATGGGAGCTCGCCCACTCCGTCGTGTCTTGCAGA
CCGAAGTGGAGGATCAACTAGCAGAGCTATTGCTGAAAGGGCAAGCCCAAGAAGGGCAAACGATCAAGGTTGGAACGACA
GCTGGAACGATCAAGTTTGAGATTGTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
76.819 |
100 |
0.77 |
| clpC | Streptococcus pneumoniae Rx1 |
76.819 |
100 |
0.77 |
| clpC | Streptococcus pneumoniae D39 |
76.819 |
100 |
0.77 |
| clpC | Streptococcus mutans UA159 |
66.218 |
100 |
0.669 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.742 |
100 |
0.651 |
| clpC | Streptococcus thermophilus LMD-9 |
64.742 |
100 |
0.651 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.601 |
100 |
0.52 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.194 |
99.011 |
0.447 |
| clpE | Streptococcus mutans UA159 |
47.528 |
77.503 |
0.368 |
| clpE | Streptococcus pneumoniae Rx1 |
45.609 |
80.222 |
0.366 |
| clpE | Streptococcus pneumoniae D39 |
45.609 |
80.222 |
0.366 |
| clpE | Streptococcus pneumoniae R6 |
45.609 |
80.222 |
0.366 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.609 |
80.222 |
0.366 |