Detailed information NTG0909452

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: SMG00_RS20850
• Genome accession: NZ_CP139417
• Coordinates: 4468093..4469373 (-)
• Length: 426 a.a.
• NCBI ID: WP_181121022.1
• Uniprot ID: A0AA40V7S4
• Organism: Stutzerimonas stutzeri strain H46
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4463093..4474373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMG00_RS20835	rpoH	4465442..4466296 (-)	855	WP_108242422.1	RNA polymerase sigma factor RpoH	-
SMG00_RS20840	ftsX	4466409..4467428 (-)	1020	WP_320893113.1	permease-like cell division protein FtsX	-
SMG00_RS20845	ftsE	4467428..4468096 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
SMG00_RS20850	pilA	4468093..4469373 (-)	1281	WP_181121022.1	signal recognition particle-docking protein FtsY	Machinery gene
SMG00_RS20855	-	4469601..4470953 (+)	1353	WP_049340272.1	pitrilysin family protein	-
SMG00_RS20860	-	4470946..4472487 (+)	1542	WP_014598017.1	pitrilysin family protein	-
SMG00_RS20865	rsmD	4472487..4473104 (+)	618	WP_011915000.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SMG00_RS20870	-	4473098..4473502 (-)	405	WP_234493151.1	ribonucleotide reductase subunit alpha	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 45453.68 Da
• Isoelectric Point: 4.5797

>NTDB_id=909452 SMG00_RS20850 WP_181121022.1 4468093..4469373(-) (pilA) [Stutzerimonas stutzeri strain H46]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANLETPAATPQYEEPHAVEADLQPTEVIE
SPLPDPVPEPEPEPEPEPEPEPISAPVVAATSEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETR
LLTADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTTIGKL
AKKLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNL
MEELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGV
GEGIDDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1281 bp

>NTDB_id=909452 SMG00_RS20850 WP_181121022.1 4468093..4469373(-) (pilA) [Stutzerimonas stutzeri strain H46]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCTCAGCCCGCTTCGGCAGAGCAGCCCGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATC
TCGAAACGCCTGCCGCAACGCCGCAGTACGAGGAGCCTCACGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCTGCCAGACCCTGTACCCGAACCCGAACCCGAACCCGAACCCGAACCCGAGCCCGAGCCGATATCTGCCCCGGT
CGTTGCGGCCACGTCGGAAGCGCCGGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCA
GCATCGGCGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAAACCCGC
CTGCTGACCGCCGACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCT
GGCCGACAGCGGCGCGCTCTACACCGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGA
TCGATGCCGGCAAGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACTACCATCGGCAAGCTG
GCCAAGAAACTGCAACTCGACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTGGAGCAGCT
GCAGGTGTGGGGCGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATG
CCGTGCAGGCCGCCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTG
ATGGAAGAGCTGAAGAAGGTCCGCCGAGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGA
TGCCGGTACCGGACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCA
AGCTCGACGGCACCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTA
GGCGAAGGTATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCCCAGCGGGAAGACGCATG
A

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (136-201)

• SRP54-type protein, GTPase domain (SRP54) (221-420)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.522	98.122	0.486