Detailed information NTG0909448

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: SMG00_RS18960
• Genome accession: NZ_CP139417
• Coordinates: 4037047..4038384 (+)
• Length: 445 a.a.
• NCBI ID: WP_192475512.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain H46
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4032047..4043384

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMG00_RS18935	pgeF	4032077..4032814 (-)	738	WP_045159695.1	peptidoglycan editing factor PgeF	-
SMG00_RS18940	rluD	4032811..4033785 (-)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
SMG00_RS18945	-	4033990..4034979 (+)	990	WP_013984073.1	outer membrane protein assembly factor BamD	-
SMG00_RS18950	-	4035101..4035334 (+)	234	WP_196111547.1	PP0621 family protein	-
SMG00_RS18955	pilS	4035324..4036916 (+)	1593	WP_013984075.1	PAS domain-containing sensor histidine kinase	Regulator
SMG00_RS18960	pilR	4037047..4038384 (+)	1338	WP_192475512.1	sigma-54 dependent transcriptional regulator	Regulator
SMG00_RS18965	-	4038428..4039486 (-)	1059	WP_320893047.1	DUF2333 family protein	-
SMG00_RS18970	-	4039704..4041299 (+)	1596	WP_014597755.1	PleD family two-component system response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49572.11 Da
• Isoelectric Point: 6.4140

>NTDB_id=909448 SMG00_RS18960 WP_192475512.1 4037047..4038384(+) (pilR) [Stutzerimonas stutzeri strain H46]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAADLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=909448 SMG00_RS18960 WP_192475512.1 4037047..4038384(+) (pilR) [Stutzerimonas stutzeri strain H46]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCAT
GAAGCTCGATACCCGCAGCGCACGCAACCTAAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGCGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGCGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGT
GGATCTGAACCGCCTGCGCGAGCTGGTCAGCACCGCCCTGCGCCTGCGCGCGCCGGCAGCCGAAGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGATGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCCAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCTATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGCGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAACGTCATCGAACTGCGTGTACCGCCGCTGCGCGAACGCCGCGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGACGCCCTGGCCAAGCTGGAGAACTATCG
ATTTCCCGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
CCGACCTGCGCCTGGCGGATAGCCCAGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCTGCCCAGCG
ACTGGGGCTGACCTTCCGCTCGATGCGCTACCGTCTGAAGAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.586	99.775	0.854
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	38.117	100	0.382