Detailed information NTG0909249

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABS748_RS26200
• Genome accession: NZ_CP158426
• Coordinates: 5095459..5096484 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NRZ14408
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5090459..5101484

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABS748_RS26185 (ABS748_26185)	-	5091484..5092530 (-)	1047	Protein_4852	DUF6531 domain-containing protein	-
ABS748_RS26190 (ABS748_26190)	rpmE	5092690..5092902 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABS748_RS26195 (ABS748_26195)	priA	5093105..5095303 (+)	2199	WP_001590975.1	primosomal protein N'	Machinery gene
ABS748_RS26200 (ABS748_26200)	cytR	5095459..5096484 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABS748_RS26205 (ABS748_26205)	ftsN	5096576..5097535 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABS748_RS26210 (ABS748_26210)	hslV	5097628..5098158 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABS748_RS26215 (ABS748_26215)	hslU	5098168..5099499 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABS748_RS26220 (ABS748_26220)	menA	5099566..5100492 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABS748_RS26225 (ABS748_26225)	rraA	5100585..5101070 (+)	486	WP_001590974.1	ribonuclease E activity regulator RraA	-
ABS748_RS26230 (ABS748_26230)	zapB	5101155..5101400 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=909249 ABS748_RS26200 WP_000644904.1 5095459..5096484(+) (cytR) [Escherichia coli strain NRZ14408]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=909249 ABS748_RS26200 WP_000644904.1 5095459..5096484(+) (cytR) [Escherichia coli strain NRZ14408]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628