Detailed information NTG0909075

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: NCY62_RS09820
• Genome accession: NZ_CP139356
• Coordinates: 2068899..2069714 (-)
• Length: 271 a.a.
• NCBI ID: WP_057062344.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain A45P
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2063899..2074714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NCY62_RS09790 (NCY62_09825)	-	2064207..2064647 (-)	441	WP_078225385.1	SRPBCC family protein	-
NCY62_RS09795 (NCY62_09830)	tadA	2064718..2065221 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
NCY62_RS09800 (NCY62_09835)	hibch	2065227..2066351 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
NCY62_RS09805 (NCY62_09840)	ung	2066348..2067061 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
NCY62_RS09810 (NCY62_09845)	-	2067115..2067711 (-)	597	WP_017386831.1	6-pyruvoyl trahydropterin synthase family protein	-
NCY62_RS09815 (NCY62_09850)	gspK	2067939..2068898 (-)	960	WP_250733539.1	type II secretion system minor pseudopilin GspK	-
NCY62_RS09820 (NCY62_09855)	xcpW	2068899..2069714 (-)	816	WP_057062344.1	type II secretion system minor pseudopilin GspJ	Machinery gene
NCY62_RS09825 (NCY62_09860)	xcpV	2069714..2070094 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
NCY62_RS09830 (NCY62_09865)	-	2070084..2070638 (-)	555	WP_057062345.1	type II secretion system protein	-
NCY62_RS09835 (NCY62_09870)	-	2070645..2071253 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
NCY62_RS09840 (NCY62_09875)	ycfH	2071290..2072063 (-)	774	WP_250733538.1	TatD family hydrolase	-
NCY62_RS09845 (NCY62_09880)	pilZ	2072081..2072422 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
NCY62_RS09850 (NCY62_09885)	holB	2072433..2073413 (-)	981	WP_250733531.1	DNA polymerase III subunit delta'	-
NCY62_RS09855 (NCY62_09890)	kdsB	2073427..2074188 (-)	762	WP_057062348.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30981.45 Da
• Isoelectric Point: 9.9307

>NTDB_id=909075 NCY62_RS09820 WP_057062344.1 2068899..2069714(-) (xcpW) [Acinetobacter pittii strain A45P]
MIKNKCFRYPSTASRLAARSEQMMRGYSEQSSSSCARTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=909075 NCY62_RS09820 WP_057062344.1 2068899..2069714(-) (xcpW) [Acinetobacter pittii strain A45P]
ATGATAAAGAATAAATGTTTTCGCTATCCAAGCACCGCTTCACGTCTTGCGGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCGGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCTTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTTCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.444	83.026	0.734