Detailed information NTG0909036

Bioinformatically predicted

Overview

• Name: fimV
• Type: Machinery gene
• Locus tag: SM130_RS13320
• Genome accession: NZ_CP139348
• Coordinates: 2962074..2964818 (-)
• Length: 914 a.a.
• NCBI ID: WP_102825570.1
• Uniprot ID: A0A2N8RZ78
• Organism: Stutzerimonas stutzeri strain KC
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2957074..2969818

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SM130_RS13295 (SM130_13295)	-	2957476..2958108 (-)	633	WP_102825575.1	SPOR domain-containing protein	-
SM130_RS13300 (SM130_13300)	folC	2958092..2959396 (-)	1305	WP_102825574.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	-
SM130_RS13305 (SM130_13305)	accD	2959393..2960286 (-)	894	WP_102825573.1	acetyl-CoA carboxylase, carboxyltransferase subunit beta	-
SM130_RS13310 (SM130_13310)	-	2960497..2961120 (-)	624	WP_102825572.1	phosphoribosylanthranilate isomerase	-
SM130_RS13315 (SM130_13315)	truA	2961211..2962071 (-)	861	WP_102825571.1	tRNA pseudouridine(38-40) synthase TruA	-
SM130_RS13320 (SM130_13320)	fimV	2962074..2964818 (-)	2745	WP_102825570.1	FimV/HubP family polar landmark protein	Machinery gene
SM130_RS13325 (SM130_13325)	-	2964964..2965974 (-)	1011	WP_102825569.1	aspartate-semialdehyde dehydrogenase	-
SM130_RS13330 (SM130_13330)	asd	2966110..2967222 (-)	1113	WP_102825568.1	aspartate-semialdehyde dehydrogenase	-
SM130_RS13335 (SM130_13335)	leuB	2967277..2968359 (-)	1083	WP_102825567.1	3-isopropylmalate dehydrogenase	-
SM130_RS13340 (SM130_13340)	leuD	2968446..2969093 (-)	648	WP_102825566.1	3-isopropylmalate dehydratase small subunit	-

Sequence

Protein

• Length: 914 a.a.
• Molecular weight: 96884.57 Da
• Isoelectric Point: 3.8875

>NTDB_id=909036 SM130_RS13320 WP_102825570.1 2962074..2964818(-) (fimV) [Stutzerimonas stutzeri strain KC]
MVRVRNLVLAIAAATALTTEMAHALGLGEVTLQSSLNQPLIAEIELLDANSLAPGEVIPVLASLEEFNRAGIDRQYFLTD
LKFTPVLRPNGKSVIQVSSSKPVREPYLNFLVEVLWPSGRLLREYTLLLDPPLYSPETAAAAAPQLPISAPVRAVEPARS
APARPAATPSSSVSTAVATQTGTEYKTSARDTLWDIAERNRRSGTVHQTMLAIQDLNPNAFIDGNINRMKSGQVLRLPDA
EQISRRSQSEAIGQVAEQNAAWRQGRSGAVAGTRQLDATRRTEAGAAPSRSDSGDNLRLVAADSGKSTAGSDTGSADGGK
ALRDKLAVTQESLDSSRRENDELKDRLNDLQGQLEKLQRLMQLKDDQLAKLQVQLGADSQAPVANGASAQPDAAPVQSPE
GQAAVEGGANGVDSAAGSVASQQEPAPAAAPAPAERPAAAKPAAKPAPAKPAAPVAEPEPKGLIDDLLSNTLLLGVVGGS
ALLLLLLGLMALSRRNAMKEAELQESLMADDTVDDLRIGTPTYVDIGQEQPESTSFQGSNASAPSDELTASTGDALAEAD
IYIAYGRFNQAAELLQNALNDEPQRSDLRLKLMEVYAELGNRDGFAREEAELREIGGATSEVEQLKYKYPAMAAMGGSAA
AVAATQMDVDSFNLDDLQLDDPSVPSAGQDLDDAFDLSLEDLDIDLNDERPTAAPAGESLNFDDLTLDEPELERDPQSAA
SDFSFDLEEDGDSSVAQSDDLSDFSFDLESEKQAGAADNEFSLDLDDEVPAAASTAFESDELDFELAEPVASPNDELPEG
FDISLDEPAFEAQPGNFADKLSEVEADLEDLSKDLEEPAPVIAADRGVADADAGADDDFDFFSDTDETTTKLDLARAYID
MGDAEGARDILDEVIAEGSDVQQQEARDMLAKLA

Nucleotide

• Length: 2745 bp

>NTDB_id=909036 SM130_RS13320 WP_102825570.1 2962074..2964818(-) (fimV) [Stutzerimonas stutzeri strain KC]
ATGGTTCGGGTTCGCAATCTGGTGCTGGCAATCGCGGCTGCTACCGCGCTGACTACAGAAATGGCCCACGCGCTTGGGTT
GGGAGAGGTCACGCTTCAGTCGTCATTGAATCAACCGCTGATCGCGGAAATCGAGCTGCTTGATGCCAACAGCCTCGCGC
CGGGAGAGGTCATCCCGGTACTGGCTTCGCTTGAGGAATTCAATCGTGCCGGAATTGATCGTCAGTATTTCCTGACCGAT
CTGAAATTCACTCCGGTATTGCGTCCGAACGGAAAAAGCGTCATCCAGGTTTCTTCCAGCAAGCCTGTACGCGAGCCCTA
TCTCAACTTTCTCGTAGAAGTGCTCTGGCCTAGCGGGCGGCTACTTCGTGAGTACACGTTGCTGCTGGATCCGCCACTGT
ATTCCCCTGAAACTGCCGCTGCGGCCGCTCCTCAATTGCCGATCTCAGCACCTGTAAGGGCCGTCGAGCCCGCTCGCTCC
GCTCCCGCGCGCCCGGCTGCCACCCCTTCCTCCAGTGTTTCGACGGCTGTTGCTACTCAGACCGGTACTGAGTACAAAAC
GTCGGCTCGCGATACGCTTTGGGATATCGCAGAGCGTAATCGTCGTAGCGGAACAGTGCACCAGACGATGCTGGCGATTC
AGGACCTCAATCCGAACGCCTTCATTGATGGCAACATCAATCGTATGAAGAGCGGGCAGGTGCTGCGCCTGCCGGATGCC
GAGCAAATTTCCCGTCGCTCTCAGTCCGAGGCTATCGGTCAGGTTGCGGAACAGAACGCAGCCTGGCGTCAGGGTCGGAG
CGGGGCGGTTGCAGGAACTCGTCAACTTGATGCGACTCGTCGTACGGAGGCAGGTGCTGCTCCGTCTCGTAGCGACTCCG
GCGACAATCTGCGGCTGGTCGCCGCTGATTCTGGCAAGTCCACTGCAGGCTCTGATACTGGCTCTGCAGACGGTGGCAAG
GCGCTGCGCGATAAGCTTGCCGTAACTCAGGAAAGCCTGGATTCCAGCCGCCGCGAAAATGATGAGCTCAAAGACCGTTT
GAATGATCTGCAGGGGCAGCTGGAGAAGTTGCAGCGTCTGATGCAGCTCAAGGATGACCAGCTTGCCAAGTTGCAAGTGC
AACTGGGTGCTGATAGTCAGGCGCCTGTTGCGAATGGCGCTTCCGCGCAGCCTGATGCAGCCCCGGTTCAATCACCGGAA
GGTCAAGCAGCGGTCGAGGGCGGCGCGAACGGAGTCGACTCTGCGGCAGGCTCTGTCGCCAGCCAGCAAGAACCAGCACC
GGCCGCCGCTCCCGCCCCGGCTGAGCGTCCCGCCGCTGCAAAGCCGGCGGCTAAACCTGCCCCCGCGAAGCCGGCAGCAC
CGGTTGCCGAGCCAGAGCCCAAGGGGCTGATTGATGACCTGCTGTCCAATACGCTGTTACTTGGCGTGGTCGGCGGTAGC
GCCCTCTTGCTACTGCTGCTCGGGCTAATGGCTTTATCGCGCCGTAACGCAATGAAGGAAGCCGAACTGCAGGAAAGCCT
GATGGCGGACGATACGGTAGACGATTTGCGAATCGGAACGCCCACATACGTCGACATTGGCCAGGAACAGCCTGAGTCCA
CTTCCTTTCAAGGCTCGAATGCATCTGCGCCGTCGGATGAACTGACCGCCTCTACAGGCGACGCGCTGGCGGAGGCCGAC
ATCTACATTGCGTATGGCCGGTTCAATCAGGCAGCCGAGCTGCTGCAGAACGCCCTTAACGATGAGCCCCAGCGTAGTGA
CTTGCGGCTCAAGCTCATGGAAGTCTATGCAGAGCTTGGCAATCGAGACGGCTTTGCCCGCGAAGAAGCGGAACTGCGCG
AAATTGGCGGAGCGACCAGCGAAGTCGAGCAGCTGAAATACAAGTATCCGGCAATGGCAGCGATGGGTGGCTCGGCAGCT
GCTGTTGCGGCTACTCAGATGGATGTGGATAGCTTCAATCTTGACGACCTTCAGCTCGATGATCCGTCTGTTCCGTCCGC
AGGGCAGGATCTGGATGATGCATTCGACCTCAGCCTGGAAGACCTGGATATCGATCTAAACGATGAGCGTCCGACTGCTG
CGCCGGCAGGTGAATCGTTGAACTTCGACGATCTGACTTTGGATGAGCCGGAACTTGAGCGCGACCCGCAATCCGCGGCA
AGCGATTTTTCGTTTGATCTGGAAGAAGACGGCGATTCGTCGGTAGCCCAGAGCGATGATCTGTCAGATTTCTCTTTCGA
CCTGGAAAGCGAGAAGCAAGCCGGAGCGGCTGATAACGAGTTTTCACTGGATCTCGATGACGAAGTGCCTGCTGCTGCGT
CTACCGCTTTCGAAAGTGATGAGCTTGATTTCGAATTGGCTGAGCCTGTGGCAAGCCCTAATGATGAGCTCCCGGAAGGG
TTCGACATCTCGCTGGACGAGCCGGCTTTCGAAGCGCAGCCAGGTAACTTTGCCGATAAGCTGAGTGAGGTCGAAGCCGA
CCTGGAGGATCTGTCCAAGGATCTGGAAGAACCAGCCCCAGTAATCGCAGCTGATCGTGGCGTAGCAGATGCTGATGCCG
GTGCGGACGATGACTTCGACTTCTTTTCTGATACGGACGAAACCACCACTAAACTGGATCTGGCTCGAGCTTATATCGAC
ATGGGCGATGCTGAAGGTGCGCGCGATATCCTCGATGAAGTGATTGCTGAGGGCAGCGACGTCCAGCAGCAAGAGGCGCG
GGATATGCTCGCCAAACTAGCCTGA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_19) (563-603)

3D structure

• AlphaFold DB: A0A2N8RZ78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimV	Pseudomonas aeruginosa PAK	51.493	100	0.528