Detailed information NTG0909006

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABRO98_RS21525
• Genome accession: NZ_CP158351
• Coordinates: 4470592..4471617 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 146
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4465592..4476617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABRO98_RS21500 (ABRO98_21485)	metJ	4466029..4466346 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABRO98_RS21505 (ABRO98_21490)	yiiX	4466530..4467138 (+)	609	WP_106495437.1	YiiX family permuted papain-like enzyme	-
ABRO98_RS21510 (ABRO98_21495)	-	4467145..4467768 (+)	624	WP_000720774.1	TIGR02117 family protein	-
ABRO98_RS21515 (ABRO98_21500)	rpmE	4467823..4468035 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABRO98_RS21520 (ABRO98_21505)	priA	4468238..4470436 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
ABRO98_RS21525 (ABRO98_21510)	cytR	4470592..4471617 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABRO98_RS21530 (ABRO98_21515)	ftsN	4471709..4472668 (+)	960	WP_000068828.1	cell division protein FtsN	-
ABRO98_RS21535 (ABRO98_21520)	hslV	4472761..4473291 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABRO98_RS21540 (ABRO98_21525)	hslU	4473301..4474632 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABRO98_RS21545 (ABRO98_21530)	menA	4474699..4475625 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABRO98_RS21550 (ABRO98_21535)	rraA	4475718..4476203 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABRO98_RS21555 (ABRO98_21540)	zapB	4476288..4476533 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=909006 ABRO98_RS21525 WP_000644904.1 4470592..4471617(+) (cytR) [Escherichia coli strain 146]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=909006 ABRO98_RS21525 WP_000644904.1 4470592..4471617(+) (cytR) [Escherichia coli strain 146]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628