Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   SOP91_RS18150 Genome accession   NZ_CP139334
Coordinates   3782241..3782867 (+) Length   208 a.a.
NCBI ID   WP_023299743.1    Uniprot ID   A0A9X7L0J6
Organism   Enterobacter hormaechei strain TO42E     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3777241..3787867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOP91_RS18130 (SOP91_18130) - 3777640..3779400 (-) 1761 WP_023305819.1 Lon protease family protein -
  SOP91_RS18135 (SOP91_18135) matP 3779587..3780039 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  SOP91_RS18140 (SOP91_18140) ompA 3780105..3781157 (-) 1053 WP_017694761.1 porin OmpA -
  SOP91_RS18145 (SOP91_18145) sulA 3781514..3782023 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  SOP91_RS18150 (SOP91_18150) sxy/tfoX 3782241..3782867 (+) 627 WP_023299743.1 TfoX/Sxy family DNA transformation protein Regulator
  SOP91_RS18155 (SOP91_18155) yccS 3782824..3784986 (-) 2163 WP_284097633.1 YccS family putative transporter -
  SOP91_RS18160 (SOP91_18160) - 3785005..3785451 (-) 447 WP_022647660.1 YccF domain-containing protein -
  SOP91_RS18165 (SOP91_18165) helD 3785574..3787628 (+) 2055 WP_284097632.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.54 Da        Isoelectric Point: 9.4592

>NTDB_id=908895 SOP91_RS18150 WP_023299743.1 3782241..3782867(+) (sxy/tfoX) [Enterobacter hormaechei strain TO42E]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=908895 SOP91_RS18150 WP_023299743.1 3782241..3782867(+) (sxy/tfoX) [Enterobacter hormaechei strain TO42E]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGTGAGCTTTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCTTCTTTTCTGACCCTGATGAAACGAGGACGTCCTGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572