Detailed information NTG0908829

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI74_RS15910
• Genome accession: NZ_CP139287
• Coordinates: 3343991..3344746 (+)
• Length: 251 a.a.
• NCBI ID: WP_057085318.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain 564U
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3338991..3349746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI74_RS15875 (SOI74_15875)	kdsB	3339517..3340278 (+)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
SOI74_RS15880 (SOI74_15880)	holB	3340292..3341272 (+)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
SOI74_RS15885 (SOI74_15885)	pilZ	3341283..3341624 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
SOI74_RS15890 (SOI74_15890)	ycfH	3341642..3342415 (+)	774	WP_057085323.1	TatD family hydrolase	-
SOI74_RS15895 (SOI74_15895)	-	3342452..3343060 (+)	609	WP_057085321.1	TetR/AcrR family transcriptional regulator	-
SOI74_RS15900 (SOI74_15900)	-	3343067..3343621 (+)	555	WP_039761075.1	type II secretion system protein	-
SOI74_RS15905 (SOI74_15905)	xcpV	3343611..3343991 (+)	381	WP_017482272.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI74_RS15910 (SOI74_15910)	xcpW	3343991..3344746 (+)	756	WP_057085318.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI74_RS15915 (SOI74_15915)	gspK	3344747..3345706 (+)	960	WP_057085316.1	type II secretion system minor pseudopilin GspK	-
SOI74_RS15920 (SOI74_15920)	-	3345934..3346530 (+)	597	WP_017386831.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI74_RS15925 (SOI74_15925)	ung	3346584..3347297 (+)	714	WP_005069527.1	uracil-DNA glycosylase	-
SOI74_RS15930 (SOI74_15930)	hibch	3347294..3348418 (+)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
SOI74_RS15935 (SOI74_15935)	tadA	3348424..3348927 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
SOI74_RS15940 (SOI74_15940)	-	3348998..3349438 (+)	441	WP_057085613.1	SRPBCC family protein	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28819.02 Da
• Isoelectric Point: 9.7317

>NTDB_id=908829 SOI74_RS15910 WP_057085318.1 3343991..3344746(+) (xcpW) [Acinetobacter pittii strain 564U]
MIKNKSFRSPSSAAHLAVRSEQMMRDYSEQSSSSCVQTKLRFVNRRSGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNNSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFKKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=908829 SOI74_RS15910 WP_057085318.1 3343991..3344746(+) (xcpW) [Acinetobacter pittii strain 564U]
ATGATAAAGAATAAAAGTTTTCGTTCTCCAAGCTCAGCTGCACATCTTGCGGTACGATCGGAGCAGATGATGAGGGATTA
CTCCGAGCAAAGCTCTTCGTCTTGCGTTCAGACAAAGCTTCGCTTTGTTAATCGTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTCTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATAATTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAAGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

• Prokaryotic N-terminal methylation motif (N_methyl) (44-67)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	79.116	99.203	0.785