Detailed information NTG0908757

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABRP05_RS22900
• Genome accession: NZ_CP158338
• Coordinates: 4671043..4672068 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 126096
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4666043..4677068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABRP05_RS22875 (ABRP05_22860)	metJ	4666480..4666797 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABRP05_RS22880 (ABRP05_22865)	yiiX	4666981..4667589 (+)	609	WP_106495437.1	YiiX family permuted papain-like enzyme	-
ABRP05_RS22885 (ABRP05_22870)	-	4667596..4668219 (+)	624	WP_000720774.1	TIGR02117 family protein	-
ABRP05_RS22890 (ABRP05_22875)	rpmE	4668274..4668486 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABRP05_RS22895 (ABRP05_22880)	priA	4668689..4670887 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
ABRP05_RS22900 (ABRP05_22885)	cytR	4671043..4672068 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABRP05_RS22905 (ABRP05_22890)	ftsN	4672160..4673119 (+)	960	WP_000068828.1	cell division protein FtsN	-
ABRP05_RS22910 (ABRP05_22895)	hslV	4673212..4673742 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABRP05_RS22915 (ABRP05_22900)	hslU	4673752..4675083 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABRP05_RS22920 (ABRP05_22905)	menA	4675150..4676076 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABRP05_RS22925 (ABRP05_22910)	rraA	4676169..4676654 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABRP05_RS22930 (ABRP05_22915)	zapB	4676739..4676984 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=908757 ABRP05_RS22900 WP_000644904.1 4671043..4672068(+) (cytR) [Escherichia coli strain 126096]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=908757 ABRP05_RS22900 WP_000644904.1 4671043..4672068(+) (cytR) [Escherichia coli strain 126096]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628