Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   SOI81_RS02275 Genome accession   NZ_CP139286
Coordinates   468494..469378 (+) Length   294 a.a.
NCBI ID   WP_320541173.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AbaK     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 463494..474378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI81_RS02250 (SOI81_02250) - 463807..465054 (-) 1248 WP_016142993.1 YihY family inner membrane protein -
  SOI81_RS02255 (SOI81_02255) wrbA 465413..466021 (+) 609 WP_320541171.1 NAD(P)H:quinone oxidoreductase -
  SOI81_RS02260 (SOI81_02260) xpt 466070..466645 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  SOI81_RS02265 (SOI81_02265) - 466718..467431 (-) 714 WP_238514030.1 DUF3108 domain-containing protein -
  SOI81_RS02270 (SOI81_02270) - 467590..468261 (-) 672 WP_320541172.1 hypothetical protein -
  SOI81_RS02275 (SOI81_02275) tonB2 468494..469378 (+) 885 WP_320541173.1 energy transducer TonB Machinery gene
  SOI81_RS02280 (SOI81_02280) ybeY 469431..469907 (-) 477 WP_002119528.1 rRNA maturation RNase YbeY -
  SOI81_RS02285 (SOI81_02285) phoL 469917..471005 (-) 1089 WP_002119513.1 PhoH family protein -
  SOI81_RS02290 (SOI81_02290) miaB 471043..472494 (-) 1452 WP_046813479.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33676.18 Da        Isoelectric Point: 9.6900

>NTDB_id=908752 SOI81_RS02275 WP_320541173.1 468494..469378(+) (tonB2) [Acinetobacter pittii strain AbaK]
MLNTRSRSKEHFHYWWQDRIFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVNQADFLAQSNQQGSGA
FREAHRTSSDTPNPMLSEASTGSAELETLQKVQQQRELKFEEKVLMTVLSWQKQANASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRRQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=908752 SOI81_RS02275 WP_320541173.1 468494..469378(+) (tonB2) [Acinetobacter pittii strain AbaK]
ATGCTGAACACCAGAAGTCGATCCAAAGAGCATTTTCATTATTGGTGGCAAGACCGAATCTTTATTGCTGCAACAATATT
GGCAATCTTGCTGCATATTTTTGTATTGCTTATTCACTTTGCCATGCCTAGCCCGTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGACCAAGCAATGAGCCAGTTAATCAGGCAGATTTTTTGGCTCAATCAAACCAGCAGGGTTCAGGTGCA
TTTCGTGAGGCTCACCGGACTTCTAGTGATACTCCAAACCCTATGCTTAGTGAGGCTTCAACTGGAAGTGCAGAGTTAGA
AACTTTGCAAAAGGTTCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTTCTAATGACGGTTTTGAGTTGGCAAAAAC
AAGCTAATGCAAGTCAGAGGAAAAAAGAATTAGAACAATTACAAAGTCAATTTCAAGCAAAAGCTGCGATGGTTGCCAGC
CTTGAAGCACAATATTTACAACGTCGGCAAGATTTTAGCCGTCAGCAAAAAATCAAGACAGTAGATGGAATTCAAGCAAA
GAAAGATGCCTCGGCTGCTTATTTAGATAAGTTTCGTGAAAAAGTGGAGCTTTACGGTAACCGCTATTATCCGGAAGAAG
CCAAACAGCAACAACTAAGAGGTGAAGTCCGTTTAATGGTGATTTTGAATGCTCAAGGTGGGATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGGCATTCAATACTAGATGAAGCCGCTAAGTCTTCAGTACGTCGCGGTGCACCATTTGGACATTTCGA
TGCCAATATGAAAGATATTTCGGAGTTACGTATTGTACGTACTTGGCGTTTTGATCCAGCTGAAGCGGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

87.415

100

0.874