Detailed information NTG0908691

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI75_RS05095
• Genome accession: NZ_CP139282
• Coordinates: 1053037..1053852 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain AE13
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1048037..1058852

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI75_RS05065 (SOI75_05065)	-	1048345..1048785 (-)	441	WP_002121449.1	SRPBCC family protein	-
SOI75_RS05070 (SOI75_05070)	tadA	1048856..1049359 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
SOI75_RS05075 (SOI75_05075)	hibch	1049365..1050489 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
SOI75_RS05080 (SOI75_05080)	ung	1050486..1051199 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
SOI75_RS05085 (SOI75_05085)	-	1051253..1051849 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI75_RS05090 (SOI75_05090)	gspK	1052077..1053036 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
SOI75_RS05095 (SOI75_05095)	xcpW	1053037..1053852 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI75_RS05100 (SOI75_05100)	xcpV	1053852..1054232 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI75_RS05105 (SOI75_05105)	-	1054222..1054776 (-)	555	WP_002121405.1	type II secretion system protein	-
SOI75_RS05110 (SOI75_05110)	-	1054783..1055391 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
SOI75_RS05115 (SOI75_05115)	ycfH	1055428..1056201 (-)	774	WP_002121462.1	TatD family hydrolase	-
SOI75_RS05120 (SOI75_05120)	pilZ	1056219..1056560 (-)	342	WP_320562658.1	PilZ domain-containing protein	-
SOI75_RS05125 (SOI75_05125)	holB	1056571..1057551 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
SOI75_RS05130 (SOI75_05130)	kdsB	1057565..1058326 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=908691 SOI75_RS05095 WP_002121460.1 1053037..1053852(-) (xcpW) [Acinetobacter pittii strain AE13]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=908691 SOI75_RS05095 WP_002121460.1 1053037..1053852(-) (xcpW) [Acinetobacter pittii strain AE13]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738