Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   SOI78_RS02655 Genome accession   NZ_CP139276
Coordinates   543473..544357 (+) Length   294 a.a.
NCBI ID   WP_005804631.1    Uniprot ID   A0A009MW24
Organism   Acinetobacter pittii strain AN37     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 538473..549357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI78_RS02630 (SOI78_02630) - 538785..540032 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  SOI78_RS02635 (SOI78_02635) wrbA 540394..540996 (+) 603 WP_320137205.1 NAD(P)H:quinone oxidoreductase -
  SOI78_RS02640 (SOI78_02640) xpt 541049..541624 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  SOI78_RS02645 (SOI78_02645) - 541697..542410 (-) 714 WP_002119525.1 DUF3108 domain-containing protein -
  SOI78_RS02650 (SOI78_02650) - 542569..543240 (-) 672 WP_017386970.1 hypothetical protein -
  SOI78_RS02655 (SOI78_02655) tonB2 543473..544357 (+) 885 WP_005804631.1 energy transducer TonB Machinery gene
  SOI78_RS02660 (SOI78_02660) ybeY 544409..544885 (-) 477 WP_005804632.1 rRNA maturation RNase YbeY -
  SOI78_RS02665 (SOI78_02665) phoL 544895..545983 (-) 1089 WP_002119513.1 PhoH family protein -
  SOI78_RS02670 (SOI78_02670) miaB 546021..547472 (-) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33668.20 Da        Isoelectric Point: 7.2966

>NTDB_id=908658 SOI78_RS02655 WP_005804631.1 543473..544357(+) (tonB2) [Acinetobacter pittii strain AN37]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGDTELESLQKIHQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=908658 SOI78_RS02655 WP_005804631.1 543473..544357(+) (tonB2) [Acinetobacter pittii strain AN37]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTGTTGCTCATTCACTTTGCCATGCCTAGCCCATCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCATCAGGCAGATTTTTTGGCACAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCATCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAACTACAAAGTCAATTTCAAGCAAAAGCTGCCATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATTAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTTATTTTGAATGCTCAAGGGGGAATTCGTGCAATCCGTCTG
CTTGAAAGTTCAGGGCATTCAATACTAGACGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009MW24

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.095

100

0.881