Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   SOI77_RS17395 Genome accession   NZ_CP139275
Coordinates   3662988..3665216 (+) Length   742 a.a.
NCBI ID   WP_039763451.1    Uniprot ID   A0A6H0FY43
Organism   Acinetobacter pittii strain HCG138     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3657988..3670216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI77_RS17370 (SOI77_17370) lnt 3658369..3659928 (+) 1560 WP_320561847.1 apolipoprotein N-acyltransferase -
  SOI77_RS17375 (SOI77_17375) csaA 3659930..3660268 (-) 339 WP_262448160.1 tRNA-binding protein -
  SOI77_RS17380 (SOI77_17380) - 3660414..3660758 (-) 345 WP_005804170.1 hypothetical protein -
  SOI77_RS17385 (SOI77_17385) gspG 3661026..3661610 (-) 585 WP_005079288.1 type II secretion system major pseudopilin GspG -
  SOI77_RS17390 (SOI77_17390) gspF 3661634..3662839 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  SOI77_RS17395 (SOI77_17395) priA 3662988..3665216 (+) 2229 WP_039763451.1 primosomal protein N' Machinery gene
  SOI77_RS17400 (SOI77_17400) kefB 3665295..3667139 (+) 1845 WP_199984204.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  SOI77_RS17405 (SOI77_17405) hslO 3667303..3668178 (+) 876 WP_262440070.1 Hsp33 family molecular chaperone HslO -
  SOI77_RS17410 (SOI77_17410) - 3668315..3668926 (+) 612 WP_004794957.1 LysE family translocator -
  SOI77_RS17415 (SOI77_17415) cbpA 3669061..3670017 (+) 957 WP_320561848.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84025.76 Da        Isoelectric Point: 8.4592

>NTDB_id=908630 SOI77_RS17395 WP_039763451.1 3662988..3665216(+) (priA) [Acinetobacter pittii strain HCG138]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEEPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGEIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=908630 SOI77_RS17395 WP_039763451.1 3662988..3665216(+) (priA) [Acinetobacter pittii strain HCG138]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGGCGCCAAAACCTGA
TTGGCATCATTACTGAAAAAGTTGATCCAAGTGAATCATTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GATGAAGAACCAATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCAGCTCAGTATTACCAATTTCCAATTGGCGA
GGTCATGCAAACCGCCCTACCTGCGTTATTGCGTCAGGGCAAACCGATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCATATCAAATTTTAAAGTTACACCCTGCC
GGAACTACAGAGAATATTCTTAATTTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCACACGATTTTAGCCCATCGCCTGTTCAATTGGCACAAATGCCGCTTACACTCAATGAAGACCAAA
AGAAAGCAACCCAGCACGTCGTAAACGCACAGCATCAATACCAAGCCTTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAAGTACTAAAGCAAGGTAAGCAAGTACTGGTGTTAGTCCCAGAAATCGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAATCGCGTTTTAACTGCGATATTGCCCTATTACACTCGGGCTTAAATGACTCCA
AACGCTTGCAGGCATGGCAACAGGCCCAGACTGGCAAAGCATCTATTATTTTAGGGACACGCTCTGCCATCTATACGCCA
CTGCCACGTTTGGGCTTAATCATTTTAGATGAAGAACATGACCTCTCTTATAAACAGCAAGAAGGCTTCCGTTACCATGC
GCGTGATGTCGCACTTTATCGAGGTCACTTGCAAAACTGCCCTGTTATTTTAGGTTCAGCAACACCGAGCATCGATAGTT
ATTATTTGGTCGAAACTGGTAAATTAACTTCACTGCAACTTAACCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATCGAACAGATTAAAAATACCCTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGATGGCAAGCAA
ATTGTCCGCATTGTGATGCCCATTTTACTTTACATACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGCACTGTT
CATCGCTTGCCAGACCATTGCCCTGAATGCCAGCAAAAAAGCTTAAAAACCCTAGGAGCAGGGACAGCCAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGACCGTGACAGTACCAGTCGTGTCGGTAGCTGGCAAA
AAATTTATGACCGTATTCATCAAAACAAACCAACAATTTTGCTTGGCACTCAAATGCTGGCAAAAGGTCATCATTTCCCA
CACGTGACTTTGGTTGCTATTTTAGATATTGATGCTGGGTTACTTAGTGTCGACATCCGTGCGCCAGAGCGTACGGCGCA
GCTGATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACATAAAGGCCATGTTTATTTACAAACCCTAAGACCAGATC
ACCCTTTACTCACCACGCTCATCGAAAAAGATTATCGGGCGGTTGCCAAACAAACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCACCTTATCGTTATGCAGTACTGATACGTGCAGAATCTAAAGATCGTGACTATACCTTACATTTTTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGAAATTGTTGATATTTGGGGTCCGATTCCAGCACCTATGGAACGTAAAGCGG
GACGCTACCGTGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTACATTTTTACTTAAGACAATGGTGGTCTCAA
TTGGTTCATGCCCCAAGACAGCATCAGCTCAGGCTATCAATTGATGTCGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0FY43

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

98.248

100

0.982