Detailed information NTG0908617

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI77_RS10300
• Genome accession: NZ_CP139275
• Coordinates: 2194870..2195685 (-)
• Length: 271 a.a.
• NCBI ID: WP_320561347.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HCG138
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2189870..2200685

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI77_RS10270 (SOI77_10270)	-	2190176..2190616 (-)	441	WP_032053807.1	SRPBCC family protein	-
SOI77_RS10275 (SOI77_10275)	tadA	2190687..2191190 (-)	504	WP_104079548.1	tRNA adenosine(34) deaminase TadA	-
SOI77_RS10280 (SOI77_10280)	hibch	2191196..2192320 (-)	1125	WP_104079547.1	enoyl-CoA hydratase/isomerase family protein	-
SOI77_RS10285 (SOI77_10285)	ung	2192317..2193030 (-)	714	WP_032053803.1	uracil-DNA glycosylase	-
SOI77_RS10290 (SOI77_10290)	-	2193084..2193680 (-)	597	WP_032053802.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI77_RS10295 (SOI77_10295)	gspK	2193910..2194869 (-)	960	WP_320561346.1	type II secretion system minor pseudopilin GspK	-
SOI77_RS10300 (SOI77_10300)	xcpW	2194870..2195685 (-)	816	WP_320561347.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI77_RS10305 (SOI77_10305)	xcpV	2195685..2196065 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI77_RS10310 (SOI77_10310)	-	2196055..2196609 (-)	555	WP_068527582.1	type II secretion system protein	-
SOI77_RS10315 (SOI77_10315)	-	2196616..2197224 (-)	609	WP_057085321.1	TetR/AcrR family transcriptional regulator	-
SOI77_RS10320 (SOI77_10320)	ycfH	2197261..2198034 (-)	774	WP_320561348.1	TatD family hydrolase	-
SOI77_RS10325 (SOI77_10325)	pilZ	2198052..2198393 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
SOI77_RS10330 (SOI77_10330)	holB	2198404..2199384 (-)	981	WP_017482275.1	DNA polymerase III subunit delta'	-
SOI77_RS10335 (SOI77_10335)	kdsB	2199398..2200159 (-)	762	WP_320561349.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30902.29 Da
• Isoelectric Point: 9.9694

>NTDB_id=908617 SOI77_RS10300 WP_320561347.1 2194870..2195685(-) (xcpW) [Acinetobacter pittii strain HCG138]
MIKNKSFRSPNSASRLAVRSEQMMRGYSEQSSSSCAQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=908617 SOI77_RS10300 WP_320561347.1 2194870..2195685(-) (xcpW) [Acinetobacter pittii strain HCG138]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAACTCAGCTTCCCGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCTGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGGTGGAAGGTTTTTGACTATTTATTAAAAGTTCGTGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.444	83.026	0.734