Detailed information NTG0908546

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI79_RS18030
• Genome accession: NZ_CP139266
• Coordinates: 3766800..3767615 (-)
• Length: 271 a.a.
• NCBI ID: WP_068976457.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HUM14
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3761800..3772615

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI79_RS18000 (SOI79_18000)	-	3762108..3762548 (-)	441	WP_014206600.1	SRPBCC family protein	-
SOI79_RS18005 (SOI79_18005)	tadA	3762619..3763122 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
SOI79_RS18010 (SOI79_18010)	hibch	3763128..3764252 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
SOI79_RS18015 (SOI79_18015)	ung	3764249..3764962 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
SOI79_RS18020 (SOI79_18020)	-	3765016..3765612 (-)	597	WP_017386831.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI79_RS18025 (SOI79_18025)	gspK	3765840..3766799 (-)	960	WP_057062343.1	type II secretion system minor pseudopilin GspK	-
SOI79_RS18030 (SOI79_18030)	xcpW	3766800..3767615 (-)	816	WP_068976457.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI79_RS18035 (SOI79_18035)	xcpV	3767615..3767995 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI79_RS18040 (SOI79_18040)	-	3767985..3768539 (-)	555	WP_068976458.1	type II secretion system protein	-
SOI79_RS18045 (SOI79_18045)	-	3768546..3769154 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
SOI79_RS18050 (SOI79_18050)	ycfH	3769191..3769964 (-)	774	WP_057062346.1	TatD family hydrolase	-
SOI79_RS18055 (SOI79_18055)	pilZ	3769982..3770323 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
SOI79_RS18060 (SOI79_18060)	holB	3770334..3771314 (-)	981	WP_057062347.1	DNA polymerase III subunit delta'	-
SOI79_RS18065 (SOI79_18065)	kdsB	3771328..3772089 (-)	762	WP_057062348.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30996.43 Da
• Isoelectric Point: 9.9307

>NTDB_id=908546 SOI79_RS18030 WP_068976457.1 3766800..3767615(-) (xcpW) [Acinetobacter pittii strain HUM14]
MIKNKCFRYPSTASRLAARSEQMMRGYSEQSSSSCARTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQQFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=908546 SOI79_RS18030 WP_068976457.1 3766800..3767615(-) (xcpW) [Acinetobacter pittii strain HUM14]
ATGATAAAGAATAAATGTTTTCGCTATCCAAGCACCGCTTCACGTCTTGCGGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCGGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCTTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCAATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTTCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88	83.026	0.731