Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   SOI79_RS10145 Genome accession   NZ_CP139266
Coordinates   2103335..2104219 (+) Length   294 a.a.
NCBI ID   WP_057061751.1    Uniprot ID   -
Organism   Acinetobacter pittii strain HUM14     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2098335..2109219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI79_RS10120 (SOI79_10120) - 2098649..2099896 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  SOI79_RS10125 (SOI79_10125) wrbA 2100257..2100859 (+) 603 WP_081037804.1 NAD(P)H:quinone oxidoreductase -
  SOI79_RS10130 (SOI79_10130) xpt 2100911..2101486 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  SOI79_RS10135 (SOI79_10135) - 2101559..2102272 (-) 714 WP_014207724.1 DUF3108 domain-containing protein -
  SOI79_RS10140 (SOI79_10140) - 2102431..2103102 (-) 672 WP_014207723.1 hypothetical protein -
  SOI79_RS10145 (SOI79_10145) tonB2 2103335..2104219 (+) 885 WP_057061751.1 energy transducer TonB Machinery gene
  SOI79_RS10150 (SOI79_10150) ybeY 2104271..2104747 (-) 477 WP_016143540.1 rRNA maturation RNase YbeY -
  SOI79_RS10155 (SOI79_10155) phoL 2104757..2105845 (-) 1089 WP_002119513.1 PhoH family protein -
  SOI79_RS10160 (SOI79_10160) miaB 2105883..2107334 (-) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33721.25 Da        Isoelectric Point: 7.6767

>NTDB_id=908540 SOI79_RS10145 WP_057061751.1 2103335..2104219(+) (tonB2) [Acinetobacter pittii strain HUM14]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPRLNDASTGDTELESLQKIHQQRELKFEEKVLMTVLSWQKQVDASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=908540 SOI79_RS10145 WP_057061751.1 2103335..2104219(+) (tonB2) [Acinetobacter pittii strain HUM14]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCCGCAACAATATT
GGCAATCTTACTGCATATTTTTGTATTGCTCATTCACTTTGCCATGCCTAGCCCCTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCATCAGGCAGATTTTTTGGCACAAGCAGATCAGCAAGGCTCGGGCGCC
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGAGGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCATCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGTGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAACTACAAAGTCAATTTCAAGCAAAAGCTGCCATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATTAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTTATTTTGAATGCTCAAGGGGGAATTCGTGCAATCCGTCTG
CTTGAAAGTTCAGGGCATTCAATACTAGACGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

87.415

100

0.874