Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   SOI73_RS18105 Genome accession   NZ_CP139262
Coordinates   3773610..3774494 (+) Length   294 a.a.
NCBI ID   WP_068544667.1    Uniprot ID   A0A8I1H832
Organism   Acinetobacter pittii strain HUM1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3768610..3779494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI73_RS18080 (SOI73_18080) - 3768923..3770170 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  SOI73_RS18085 (SOI73_18085) wrbA 3770532..3771134 (+) 603 WP_081318513.1 NAD(P)H:quinone oxidoreductase -
  SOI73_RS18090 (SOI73_18090) xpt 3771186..3771761 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  SOI73_RS18095 (SOI73_18095) - 3771834..3772547 (-) 714 WP_002119525.1 DUF3108 domain-containing protein -
  SOI73_RS18100 (SOI73_18100) - 3772706..3773377 (-) 672 WP_014207723.1 hypothetical protein -
  SOI73_RS18105 (SOI73_18105) tonB2 3773610..3774494 (+) 885 WP_068544667.1 energy transducer TonB Machinery gene
  SOI73_RS18110 (SOI73_18110) ybeY 3774547..3775023 (-) 477 WP_002119528.1 rRNA maturation RNase YbeY -
  SOI73_RS18115 (SOI73_18115) phoL 3775033..3776121 (-) 1089 WP_002119513.1 PhoH family protein -
  SOI73_RS18120 (SOI73_18120) miaB 3776159..3777610 (-) 1452 WP_068544669.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33576.18 Da        Isoelectric Point: 7.6072

>NTDB_id=908500 SOI73_RS18105 WP_068544667.1 3773610..3774494(+) (tonB2) [Acinetobacter pittii strain HUM1]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVVQADFLAQADQQGAGA
FREAHRTSSDTPNPMLNDASTGNTELESLQKIQQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=908500 SOI73_RS18105 WP_068544667.1 3773610..3774494(+) (tonB2) [Acinetobacter pittii strain HUM1]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCCGCAACAATATT
GGCAATCTTACTGCATATTTTTGTATTGCTCATTCACTTTGCCATGCCTAGCCCCTCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTGTTCAGGCAGATTTTTTAGCGCAAGCAGATCAGCAAGGTGCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAAATACTGAGTTAGA
AAGTTTGCAAAAGATACAGCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAACTACAAAGTCAATTTCAAGCAAAAGCTGCCATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATAAAGACAGTAGACGGAATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGCTTG
CTTGAAAGCTCAGGGCATTCAATACTAGATGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATAGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.435

100

0.884