Detailed information NTG0908458

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI73_RS06810
• Genome accession: NZ_CP139262
• Coordinates: 1434054..1434809 (-)
• Length: 251 a.a.
• NCBI ID: WP_005069530.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HUM1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1429054..1439809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI73_RS06780 (SOI73_06780)	-	1429362..1429802 (-)	441	WP_002121449.1	SRPBCC family protein	-
SOI73_RS06785 (SOI73_06785)	tadA	1429873..1430376 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
SOI73_RS06790 (SOI73_06790)	hibch	1430382..1431506 (-)	1125	WP_320134481.1	enoyl-CoA hydratase/isomerase family protein	-
SOI73_RS06795 (SOI73_06795)	ung	1431503..1432216 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
SOI73_RS06800 (SOI73_06800)	-	1432270..1432866 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI73_RS06805 (SOI73_06805)	gspK	1433094..1434053 (-)	960	WP_005076277.1	type II secretion system minor pseudopilin GspK	-
SOI73_RS06810 (SOI73_06810)	xcpW	1434054..1434809 (-)	756	WP_005069530.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI73_RS06815 (SOI73_06815)	xcpV	1434809..1435189 (-)	381	WP_086376637.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI73_RS06820 (SOI73_06820)	-	1435179..1435733 (-)	555	WP_005069534.1	type II secretion system protein	-
SOI73_RS06825 (SOI73_06825)	-	1435740..1436348 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
SOI73_RS06830 (SOI73_06830)	ycfH	1436385..1437158 (-)	774	WP_005069538.1	TatD family hydrolase	-
SOI73_RS06835 (SOI73_06835)	pilZ	1437176..1437517 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
SOI73_RS06840 (SOI73_06840)	holB	1437528..1438508 (-)	981	WP_196257291.1	DNA polymerase III subunit delta'	-
SOI73_RS06845 (SOI73_06845)	kdsB	1438522..1439283 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28682.93 Da
• Isoelectric Point: 9.5669

>NTDB_id=908458 SOI73_RS06810 WP_005069530.1 1434054..1434809(-) (xcpW) [Acinetobacter pittii strain HUM1]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=908458 SOI73_RS06810 WP_005069530.1 1434054..1434809(-) (xcpW) [Acinetobacter pittii strain HUM1]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80.4	99.602	0.801