Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   SOI72_RS02375 Genome accession   NZ_CP139255
Coordinates   480076..480960 (+) Length   294 a.a.
NCBI ID   WP_005804631.1    Uniprot ID   A0A009MW24
Organism   Acinetobacter pittii strain MCR16048     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 475076..485960
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI72_RS02350 (SOI72_02350) - 475388..476635 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  SOI72_RS02355 (SOI72_02355) wrbA 476997..477599 (+) 603 WP_081313625.1 NAD(P)H:quinone oxidoreductase -
  SOI72_RS02360 (SOI72_02360) xpt 477652..478227 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  SOI72_RS02365 (SOI72_02365) - 478300..479013 (-) 714 WP_002119525.1 DUF3108 domain-containing protein -
  SOI72_RS02370 (SOI72_02370) - 479172..479843 (-) 672 WP_017386970.1 hypothetical protein -
  SOI72_RS02375 (SOI72_02375) tonB2 480076..480960 (+) 885 WP_005804631.1 energy transducer TonB Machinery gene
  SOI72_RS02380 (SOI72_02380) ybeY 481012..481488 (-) 477 WP_005804632.1 rRNA maturation RNase YbeY -
  SOI72_RS02385 (SOI72_02385) phoL 481498..482586 (-) 1089 WP_002119513.1 PhoH family protein -
  SOI72_RS02390 (SOI72_02390) miaB 482624..484075 (-) 1452 WP_002119558.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33668.20 Da        Isoelectric Point: 7.2966

>NTDB_id=908375 SOI72_RS02375 WP_005804631.1 480076..480960(+) (tonB2) [Acinetobacter pittii strain MCR16048]
MLNKRSLSIEPFHHWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGDTELESLQKIHQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=908375 SOI72_RS02375 WP_005804631.1 480076..480960(+) (tonB2) [Acinetobacter pittii strain MCR16048]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATCATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTGTTGCTCATTCACTTTGCCATGCCTAGCCCATCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCATCAGGCAGATTTTTTGGCACAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGGACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCATCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAACTACAAAGTCAATTTCAAGCAAAAGCTGCCATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATTAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTTATTTTGAATGCTCAAGGGGGAATTCGTGCAATCCGTCTG
CTTGAAAGTTCAGGGCATTCAATACTAGACGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCCAATATGAAAGATATTTCGGAGTTGCGTATTGTACGTACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009MW24

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.095

100

0.881