Detailed information NTG0908339

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABR757_RS24740
• Genome accession: NZ_CP158311
• Coordinates: 5105853..5106878 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CS5L
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5100853..5111878

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABR757_RS24720 (ABR757_24695)	metJ	5102038..5102355 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABR757_RS24725 (ABR757_24700)	yiiX	5102415..5103023 (+)	609	WP_000702304.1	YiiX family permuted papain-like enzyme	-
ABR757_RS24730 (ABR757_24705)	rpmE	5103084..5103296 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABR757_RS24735 (ABR757_24710)	priA	5103499..5105697 (+)	2199	WP_012311784.1	primosomal protein N'	Machinery gene
ABR757_RS24740 (ABR757_24715)	cytR	5105853..5106878 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABR757_RS24745 (ABR757_24720)	ftsN	5106970..5107929 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABR757_RS24750 (ABR757_24725)	hslV	5108022..5108552 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABR757_RS24755 (ABR757_24730)	hslU	5108562..5109893 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABR757_RS24760 (ABR757_24735)	menA	5109960..5110886 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABR757_RS24765 (ABR757_24740)	rraA	5110979..5111464 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=908339 ABR757_RS24740 WP_000644904.1 5105853..5106878(+) (cytR) [Escherichia coli strain CS5L]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=908339 ABR757_RS24740 WP_000644904.1 5105853..5106878(+) (cytR) [Escherichia coli strain CS5L]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAGCACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628