Detailed information NTG0908292

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI76_RS09935
• Genome accession: NZ_CP139249
• Coordinates: 2090231..2090986 (-)
• Length: 251 a.a.
• NCBI ID: WP_104079544.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain MCR8900
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2085231..2095986

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI76_RS09905 (SOI76_09905)	-	2085538..2085978 (-)	441	WP_032053807.1	SRPBCC family protein	-
SOI76_RS09910 (SOI76_09910)	tadA	2086048..2086551 (-)	504	WP_104079548.1	tRNA adenosine(34) deaminase TadA	-
SOI76_RS09915 (SOI76_09915)	hibch	2086557..2087681 (-)	1125	WP_104079547.1	enoyl-CoA hydratase/isomerase family protein	-
SOI76_RS09920 (SOI76_09920)	ung	2087678..2088391 (-)	714	WP_032053803.1	uracil-DNA glycosylase	-
SOI76_RS09925 (SOI76_09925)	-	2088445..2089041 (-)	597	WP_104079546.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI76_RS09930 (SOI76_09930)	gspK	2089271..2090230 (-)	960	WP_104079545.1	type II secretion system minor pseudopilin GspK	-
SOI76_RS09935 (SOI76_09935)	xcpW	2090231..2090986 (-)	756	WP_104079544.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI76_RS09940 (SOI76_09940)	xcpV	2090986..2091366 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI76_RS09945 (SOI76_09945)	-	2091356..2091907 (-)	552	WP_032053797.1	type II secretion system protein	-
SOI76_RS09950 (SOI76_09950)	-	2091914..2092522 (-)	609	WP_016141197.1	TetR/AcrR family transcriptional regulator	-
SOI76_RS09955 (SOI76_09955)	ycfH	2092559..2093332 (-)	774	WP_104079543.1	TatD family hydrolase	-
SOI76_RS09960 (SOI76_09960)	pilZ	2093350..2093691 (-)	342	WP_104079542.1	PilZ domain-containing protein	-
SOI76_RS09965 (SOI76_09965)	holB	2093702..2094682 (-)	981	WP_104079541.1	DNA polymerase III subunit delta'	-
SOI76_RS09970 (SOI76_09970)	kdsB	2094696..2095457 (-)	762	WP_104079540.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28700.90 Da
• Isoelectric Point: 9.5669

>NTDB_id=908292 SOI76_RS09935 WP_104079544.1 2090231..2090986(-) (xcpW) [Acinetobacter pittii strain MCR8900]
MIKNKYSRSPSTASRLAVRSEQMMRGYSEQSSSSCAQTKLRFVNPCSGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=908292 SOI76_RS09935 WP_104079544.1 2090231..2090986(-) (xcpW) [Acinetobacter pittii strain MCR8900]
ATGATAAAGAATAAATATTCTCGTTCTCCAAGCACTGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCATCTTGCGCTCAGACAAAGCTTCGCTTTGTTAATCCTTGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80	99.602	0.797