Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   SOI69_RS17655 Genome accession   NZ_CP139248
Coordinates   3729979..3730863 (+) Length   294 a.a.
NCBI ID   WP_317808354.1    Uniprot ID   -
Organism   Acinetobacter pittii strain HCG18     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3724979..3735863
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOI69_RS17630 (SOI69_17630) - 3725291..3726538 (-) 1248 WP_002119535.1 YihY family inner membrane protein -
  SOI69_RS17635 (SOI69_17635) wrbA 3726900..3727502 (+) 603 WP_320539708.1 NAD(P)H:quinone oxidoreductase -
  SOI69_RS17640 (SOI69_17640) xpt 3727555..3728130 (-) 576 WP_002119547.1 xanthine phosphoribosyltransferase -
  SOI69_RS17645 (SOI69_17645) - 3728203..3728916 (-) 714 WP_002119525.1 DUF3108 domain-containing protein -
  SOI69_RS17650 (SOI69_17650) - 3729075..3729746 (-) 672 WP_002119526.1 hypothetical protein -
  SOI69_RS17655 (SOI69_17655) tonB2 3729979..3730863 (+) 885 WP_317808354.1 TonB family protein Machinery gene
  SOI69_RS17660 (SOI69_17660) ybeY 3730915..3731391 (-) 477 WP_002119528.1 rRNA maturation RNase YbeY -
  SOI69_RS17665 (SOI69_17665) phoL 3731401..3732489 (-) 1089 WP_002119513.1 PhoH family protein -
  SOI69_RS17670 (SOI69_17670) miaB 3732527..3733978 (-) 1452 WP_014207720.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33694.24 Da        Isoelectric Point: 7.2527

>NTDB_id=908273 SOI69_RS17655 WP_317808354.1 3729979..3730863(+) (tonB2) [Acinetobacter pittii strain HCG18]
MLNKRSLSIEPFHYWWQDRVFIAATILAILLHIFVLLIHFAMPSPSEQSTKEIAISIRPSNEPVHQADFLAQADQQGSGA
FREAHRTSSDTPNPMLNDASTGDTELESLQKIHQQRELKFEEKVLMTVLSWQKQADASQRKKELEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAIYLDKFREKVELYGNRYYPEEAKQQQLRGEVRLMVILNAQGGIRAIRL
LESSGHSILDEAAKSSVRRGAPFGHFDANMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=908273 SOI69_RS17655 WP_317808354.1 3729979..3730863(+) (tonB2) [Acinetobacter pittii strain HCG18]
ATGTTGAACAAAAGAAGTTTATCCATAGAGCCTTTTCATTATTGGTGGCAAGACCGAGTCTTTATTGCTGCAACAATATT
GGCAATCTTACTGCATATTTTTGTATTGCTCATTCACTTTGCCATGCCTAGCCCATCAGAGCAATCTACTAAAGAAATTG
CAATTTCAATTCGGCCAAGCAATGAGCCAGTTCACCAAGCAGATTTTTTAGCGCAAGCAGATCAGCAAGGCTCGGGCGCA
TTTCGTGAAGCTCATCGAACTTCTAGTGATACTCCAAATCCGATGCTCAATGATGCTTCAACTGGAGATACTGAGTTAGA
AAGTTTGCAAAAGATTCATCAACAAAGAGAGCTTAAATTTGAAGAAAAAGTTTTAATGACGGTTTTGAGTTGGCAGAAAC
AAGCGGATGCAAGCCAAAGAAAAAAAGAACTAGAACAACTACAAAGTCAATTTCAAGCAAAAGCTGCTATGGTTGCAAGC
CTTGAAGCACAATATTTGCAACGCCAACAAGATTTCAGCCGTCAGCAAAAAATTAAAACAGTAGATGGTATTCAAGCAAA
GAAAGATGCTTCAGCTATTTATTTAGATAAATTTCGTGAAAAAGTAGAGCTTTACGGTAATCGCTATTACCCTGAAGAAG
CCAAACAGCAACAGCTAAGAGGTGAAGTGCGTTTAATGGTTATTTTGAATGCTCAAGGCGGAATTCGTGCAATCCGTCTG
CTTGAAAGTTCAGGGCATTCAATACTAGACGAAGCAGCGAAGTCTTCAGTACGCCGCGGCGCACCATTTGGGCATTTTGA
TGCGAATATGAAAGATATTTCGGAGTTGCGTATTGTACGCACTTGGCGTTTTGACCCAGCTGAAGCTGAATTTGAGGTTC
ACTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

88.435

100

0.884