Detailed information NTG0908231

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SOI69_RS06705
• Genome accession: NZ_CP139248
• Coordinates: 1418487..1419302 (-)
• Length: 271 a.a.
• NCBI ID: WP_320124016.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain HCG18
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1413487..1424302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI69_RS06675 (SOI69_06675)	-	1413794..1414234 (-)	441	WP_014206600.1	SRPBCC family protein	-
SOI69_RS06680 (SOI69_06680)	tadA	1414305..1414808 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
SOI69_RS06685 (SOI69_06685)	hibch	1414814..1415938 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
SOI69_RS06690 (SOI69_06690)	ung	1415935..1416648 (-)	714	WP_069119298.1	uracil-DNA glycosylase	-
SOI69_RS06695 (SOI69_06695)	-	1416702..1417298 (-)	597	WP_017386831.1	6-pyruvoyl trahydropterin synthase family protein	-
SOI69_RS06700 (SOI69_06700)	gspK	1417527..1418486 (-)	960	WP_320124015.1	type II secretion system minor pseudopilin GspK	-
SOI69_RS06705 (SOI69_06705)	xcpW	1418487..1419302 (-)	816	WP_320124016.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SOI69_RS06710 (SOI69_06710)	xcpV	1419302..1419682 (-)	381	WP_320540279.1	type II secretion system minor pseudopilin GspI	Machinery gene
SOI69_RS06715 (SOI69_06715)	-	1419672..1420226 (-)	555	WP_039761075.1	type II secretion system protein	-
SOI69_RS06720 (SOI69_06720)	-	1420233..1420841 (-)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
SOI69_RS06725 (SOI69_06725)	ycfH	1420878..1421651 (-)	774	WP_141315263.1	TatD family hydrolase	-
SOI69_RS06730 (SOI69_06730)	pilZ	1421669..1422010 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
SOI69_RS06735 (SOI69_06735)	holB	1422021..1423001 (-)	981	WP_262461179.1	DNA polymerase III subunit delta'	-
SOI69_RS06740 (SOI69_06740)	kdsB	1423015..1423776 (-)	762	WP_064784077.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30987.41 Da
• Isoelectric Point: 9.8258

>NTDB_id=908231 SOI69_RS06705 WP_320124016.1 1418487..1419302(-) (xcpW) [Acinetobacter pittii strain HCG18]
MIKNKCFRYPSTASRLAARSEQMMRGYSEQSSSSCAQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVFTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVSYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=908231 SOI69_RS06705 WP_320124016.1 1418487..1419302(-) (xcpW) [Acinetobacter pittii strain HCG18]
ATGATAAAGAATAAATGTTTTCGCTATCCAAGCACCGCTTCACGTCTTGCGGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCATCTTGCGCTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTTA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88	83.026	0.731