Detailed information NTG0908113

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SJN48_RS10905
• Genome accession: NZ_CP139212
• Coordinates: 2329918..2330673 (-)
• Length: 251 a.a.
• NCBI ID: WP_039761079.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain WWTP
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2324918..2335673

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SJN48_RS10875 (SJN48_10910)	-	2325224..2325664 (-)	441	WP_014206600.1	SRPBCC family protein	-
SJN48_RS10880 (SJN48_10915)	tadA	2325736..2326239 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
SJN48_RS10885 (SJN48_10920)	hibch	2326245..2327369 (-)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
SJN48_RS10890 (SJN48_10925)	ung	2327366..2328079 (-)	714	WP_005069527.1	uracil-DNA glycosylase	-
SJN48_RS10895 (SJN48_10930)	-	2328133..2328729 (-)	597	WP_039761085.1	6-carboxytetrahydropterin synthase	-
SJN48_RS10900 (SJN48_10935)	gspK	2328958..2329917 (-)	960	WP_039761082.1	type II secretion system minor pseudopilin GspK	-
SJN48_RS10905 (SJN48_10940)	xcpW	2329918..2330673 (-)	756	WP_039761079.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SJN48_RS10910 (SJN48_10945)	xcpV	2330673..2331053 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
SJN48_RS10915 (SJN48_10950)	-	2331043..2331597 (-)	555	WP_039761075.1	type II secretion system protein	-
SJN48_RS10920 (SJN48_10955)	-	2331604..2332212 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
SJN48_RS10925 (SJN48_10960)	ycfH	2332249..2333022 (-)	774	WP_005069538.1	TatD family hydrolase	-
SJN48_RS10930 (SJN48_10965)	pilZ	2333040..2333381 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
SJN48_RS10935 (SJN48_10970)	holB	2333392..2334372 (-)	981	WP_039761071.1	DNA polymerase III subunit delta'	-
SJN48_RS10940 (SJN48_10975)	kdsB	2334386..2335147 (-)	762	WP_039761068.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28706.92 Da
• Isoelectric Point: 10.1556

>NTDB_id=908113 SJN48_RS10905 WP_039761079.1 2329918..2330673(-) (xcpW) [Acinetobacter pittii strain WWTP]
MIKNKSFRSPSSASRLAVRSEQMMRGYSKQSSSSSAQTKLRFVNPRSGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=908113 SJN48_RS10905 WP_039761079.1 2329918..2330673(-) (xcpW) [Acinetobacter pittii strain WWTP]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCCCGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCTAAGCAAAGCTCTTCGTCTTCCGCTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGGTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTAAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAACATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	79.6	99.602	0.793