Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   SJN48_RS03390 Genome accession   NZ_CP139212
Coordinates   685406..689911 (+) Length   1501 a.a.
NCBI ID   WP_130120770.1    Uniprot ID   -
Organism   Acinetobacter pittii strain WWTP     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 680406..694911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SJN48_RS03365 (SJN48_03370) - 680849..681487 (-) 639 WP_044100316.1 hypothetical protein -
  SJN48_RS03370 (SJN48_03375) pilG 681772..682155 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  SJN48_RS03375 (SJN48_03380) pilH 682178..682540 (+) 363 WP_002116220.1 PleD family two-component system response regulator -
  SJN48_RS03380 (SJN48_03385) pilI 682601..683137 (+) 537 WP_002116439.1 chemotaxis protein CheW -
  SJN48_RS03385 (SJN48_03390) pilJ 683180..685258 (+) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  SJN48_RS03390 (SJN48_03395) chpA 685406..689911 (+) 4506 WP_130120770.1 hybrid sensor histidine kinase/response regulator Regulator
  SJN48_RS03395 (SJN48_03400) - 689911..690378 (+) 468 WP_213073458.1 hypothetical protein -
  SJN48_RS03400 (SJN48_03405) dapE 690413..691549 (-) 1137 WP_005072799.1 succinyl-diaminopimelate desuccinylase -
  SJN48_RS03405 (SJN48_03410) - 691676..691819 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  SJN48_RS03410 (SJN48_03415) - 691943..692824 (-) 882 WP_101664612.1 DUF1853 family protein -
  SJN48_RS03415 (SJN48_03420) - 692928..693296 (+) 369 WP_017400240.1 YbaN family protein -
  SJN48_RS03420 (SJN48_03425) elsL 693387..693890 (+) 504 WP_101664614.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1501 a.a.        Molecular weight: 171473.04 Da        Isoelectric Point: 4.4178

>NTDB_id=908109 SJN48_RS03390 WP_130120770.1 685406..689911(+) (chpA) [Acinetobacter pittii strain WWTP]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFIEEIEEIFVELQSLIHEWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLELTLNIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAETQTGLETNDLEPESTEVLTILTPEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRDYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSESLETHQDVFEPLFNA
EVEQTANEPLIENVFTDQVTIGQSLQLDRQFISSEHVNRHFEPDLLDIFLEEADELLEGMDTDLNLWVDDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLVASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFYSHIKESKTESETYVIPELNFEVLQQEAINNTALNLSELTSASEQIAASSNQLVEQTELQVLYADHDQKESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQRLENIQFIETAIQIPSKLTRTDLLSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGIDVVVTF
KDDGQGIDIEKVRQKALMSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQELFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHK
SLNENIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=908109 SJN48_RS03390 WP_130120770.1 685406..689911(+) (chpA) [Acinetobacter pittii strain WWTP]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGACGATGAATTTCT
TGAAATATTTATCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATA
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCTGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTTAATCGGGTAATTAATCAGAGTCTCGAATTAACTCTTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTGAAACTCAAACTGGTTTAGAAACAAATGACTTAGAACCAGAATCTACAGAAGTTTTAACTATTTT
GACTCCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGATGCCAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCATTCAGAAGAAATTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTAG
ATCTATTAGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGGTTTGGGATGCTTACATG
GAGCAGCATGGTGAGCATTCGAGCCCACTCATGCCTCCACATGGTTTAGTGTCTCAGCTATTACAGCTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACATACTCAATCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGACTTATTGCAATCAGATTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCGTTAGCTGCGGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGATGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCTGAATCCTTAGAAACTCATCAAGACGTTTTTGAACCATTGTTTAATGCT
GAAGTTGAACAAACGGCGAATGAACCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTTTACAACT
AGATCGACAGTTTATTTCATCTGAGCATGTAAACCGTCATTTTGAACCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAGGGAATGGATACAGATCTTAATCTTTGGGTTGATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGGTAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTTATTCTCATATTAAAGAGAGCAAAACAGAATCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGCGTTAAACCTCAGTGAGTTAACTTCTGCTTCTGAGCAGATTGCTGCGT
CTAGTAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACGATCAAAAAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACATTCATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCACTTATTAAAACA
ATGGTTCGAGCAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGCTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGACTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTACTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTAGAAACCCAAATTATTGCAAAACACGGTATTGAGAAC
TCACGTTATACGGAATTTGATCCTTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCAGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGAGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTTATGCGAACACGCTTAGTACCATTTTCTCGATTGTTGCCTCGTCTGCAAAGA
ATTGTGAGGCAGACTTCTACCGCGTTAAATCGACCAGCAGAGCTTTTCGTTAATAATACAGAAGGCGAGCTGGACCGGAC
AATGTTAGAACGTTTGGTTACGCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGACTAGAAGACCGTGCGCAAC
GTGAGCAAGCGCAGAAACCAGAAACGGGACGTATTGAACTCAATATTCATCGTCAAGGTATAGATGTTGTAGTTACATTT
AAGGATGATGGGCAAGGTATTGATATCGAGAAGGTTCGTCAAAAGGCGTTAATGTCTGGTTTGATTAATCCAGAGCAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGTACAGCCGATCAAGTCACTCAGATCTCAGGTC
GTGGCGTAGGGCTGGATGTAGTGCAAAGTGATATTAAGGCCTTAGGTGGCCATGTGAGTGTCGACTCTGTATATGGGCAG
GGAACTGTCTTTACCATACGTGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATCCCACTGGCTCAGATTGATCGAATTGTACGAGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGCACAAG
AGCTCTTTGAATTTGAAAATAAGCGTTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCATTATTAGTTGACCAACT
GATTGGCTCACGCGCACAGATTGTAGTTAAGCCAATAGGACAACAATTCTCTAGCATTGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGCCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAATCTACTCGCCGACATAAA
TCGCTTAATGAAAATATCTATAGACAACGCGAGTCTGACGAGCGACGTCTTATCATGATTGTAGATGACTCGGTAACTGT
ACGTAAGGTGACGTCTCGCTTACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTTGATGCCATTGAGC
AGTTGGAAAATATTAAACCAGATCTCATGTTACTTGATATTGAAATGCCGCGAATGGATGGCTTTGAGGTACTTAACCTC
GTTCGACATCATGATCTACATCAAGATATGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGC
ATTTACTTTAGGTGTTAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATTTGAAGGGGGACTTGCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

80.053

100

0.805