Detailed information NTG0908079

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: SON02_RS08785
• Genome accession: NZ_CP139211
• Coordinates: 2008913..2011123 (-)
• Length: 736 a.a.
• NCBI ID: WP_135027350.1
• Uniprot ID: -
• Organism: Streptococcus sp. LysM4
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 2003913..2016123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SON02_RS08765 (SON02_08745)	-	2004308..2004748 (+)	441	WP_135027360.1	GNAT family N-acetyltransferase	-
SON02_RS08770 (SON02_08750)	ileS	2004761..2007559 (+)	2799	WP_135027358.1	isoleucine--tRNA ligase	-
SON02_RS08775 (SON02_08755)	-	2008039..2008341 (-)	303	WP_135027354.1	DUF1827 family protein	-
SON02_RS08780 (SON02_08760)	-	2008402..2008854 (-)	453	WP_135027352.1	NUDIX hydrolase	-
SON02_RS08785 (SON02_08765)	clpE	2008913..2011123 (-)	2211	WP_135027350.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
SON02_RS08790 (SON02_08770)	-	2012149..2012379 (+)	231	WP_135027349.1	DUF1797 family protein	-
SON02_RS08795 (SON02_08775)	-	2012505..2013194 (+)	690	WP_135027346.1	amino acid ABC transporter permease	-
SON02_RS08800 (SON02_08780)	-	2013187..2013921 (+)	735	WP_135027344.1	amino acid ABC transporter ATP-binding protein	-
SON02_RS08805 (SON02_08785)	-	2014525..2015388 (+)	864	WP_135027343.1	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 81829.36 Da
• Isoelectric Point: 5.7113

>NTDB_id=908079 SON02_RS08785 WP_135027350.1 2008913..2011123(-) (clpE) [Streptococcus sp. LysM4]
MLCHNCNINDATIHLYTNLNGKQQQVDLCHNCYQIMKTDPNNAILKGLGDLTNPNNMDPFSEFFNNIGGIPGHTPAGKPR
NQTPPTQSGGGNRGNNGGATPPQQPKGLLEEFGINMTEIARRGDIDPVIGRDEEIKRVIEILNRRTKNNPVLIGEPGVGK
TAVVEGLAQKIVDGDVPQKLQGREVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRKEIILFIDEIHEIVGAGSTGDGN
MDAGNILKPALARGEMQLVGATTLNEYRIIEKDAALERRMQPVKVNEPSVSETIIILKGIQSKYQDYHHVKYTDAAIEAA
AILSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDQRLIDAENRKTQATRDEDFEKAAYYRDQIAKYKEMQKAT
ISNEDIPVITEKEIEAIIEQKTNIPVGDLKEKEQSQLINLANDLKKHVIGQDTAVDKIAKAIRRNRVGLGAPNRPIGSFL
FVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSLILLDEIEKA
HPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGASLEGRTHSVLGQLSNFFSPEFMNRFDGIV
EFQALSKENLLHIVDLMLLDINERLKTTGLTLHVTDKVKEKLVDLGYDPKMGARPLRRTIQEYIEDPLTDFYLEHPEEQN
LRAVLTSKGAIAIKAK

Nucleotide

• Length: 2211 bp

>NTDB_id=908079 SON02_RS08785 WP_135027350.1 2008913..2011123(-) (clpE) [Streptococcus sp. LysM4]
ATGCTTTGTCATAACTGTAATATCAACGATGCAACCATTCATCTCTATACAAATCTTAATGGAAAACAACAACAGGTGGA
TCTCTGTCACAACTGCTACCAAATCATGAAAACGGACCCTAATAATGCTATTTTAAAAGGATTGGGAGACCTTACCAATC
CAAATAACATGGATCCATTCAGCGAATTTTTCAATAACATTGGAGGCATTCCAGGGCATACACCTGCTGGAAAACCGCGC
AATCAAACGCCACCTACCCAGTCAGGTGGTGGCAATCGTGGCAACAACGGCGGTGCTACTCCTCCACAACAACCAAAAGG
ATTGCTGGAGGAATTTGGCATTAACATGACTGAAATTGCCCGCCGTGGAGATATCGATCCTGTCATTGGCCGTGATGAGG
AAATCAAGCGTGTCATCGAAATTCTCAACCGTAGAACCAAGAATAATCCTGTCCTCATCGGTGAGCCTGGGGTCGGAAAA
ACAGCCGTTGTCGAAGGCTTAGCCCAAAAAATCGTGGACGGTGATGTCCCACAAAAACTCCAAGGTCGTGAAGTCATTCG
CCTTGATGTCGTTAGTCTTGTTCAAGGAACCGGTATCCGCGGGCAATTTGAAGAGCGCATGCAAAAGCTAATGGAAGAAA
TCCGCAATCGCAAGGAAATCATTCTCTTCATTGATGAAATTCATGAAATTGTCGGCGCCGGATCTACAGGTGACGGCAAC
ATGGACGCAGGCAATATCTTAAAACCTGCCCTTGCTCGTGGTGAAATGCAACTGGTTGGCGCTACTACGCTCAACGAGTA
CCGTATTATCGAAAAAGATGCAGCCTTGGAGCGTCGCATGCAACCTGTCAAGGTCAATGAACCAAGTGTCAGTGAGACGA
TTATCATTCTAAAAGGGATTCAAAGCAAATACCAGGACTATCACCATGTTAAATACACCGATGCAGCCATTGAAGCAGCA
GCCATTTTATCAAACCGCTACATTCAAGATCGCTTCTTACCGGATAAGGCCATTGATTTGCTAGATGAAGCTGGCTCTAA
GATGAACTTGACTTTGAATTTCGTTGATCCAAAAGAAATTGACCAACGCTTGATTGATGCCGAAAATCGCAAGACCCAAG
CTACTCGCGATGAAGATTTTGAAAAAGCAGCCTATTATCGTGATCAAATCGCAAAATATAAGGAGATGCAAAAAGCAACG
ATCAGCAACGAAGATATACCCGTCATTACGGAAAAAGAAATTGAAGCCATTATCGAACAAAAAACCAATATTCCTGTCGG
TGATTTGAAAGAAAAAGAACAATCGCAATTGATTAACCTAGCCAATGACTTAAAAAAACATGTCATCGGTCAAGATACTG
CCGTTGATAAAATTGCTAAGGCCATTCGTCGCAACCGAGTGGGGCTCGGTGCACCGAACCGTCCAATTGGAAGTTTCCTC
TTCGTTGGACCAACGGGAGTCGGAAAGACTGAACTGTCAAAACAATTAGCCATTGAACTCTTTGGATCTGCCGACAATAT
GATTCGCTTTGATATGTCCGAATATATGGAAAAACATGCCGTCGCAAAATTAGTCGGAGCACCTCCAGGCTACGTTGGCT
ACGAAGAAGCTGGACAACTGACTGAAAAAGTCCGCCGCAATCCTTACTCGCTCATTCTGCTTGACGAGATTGAAAAGGCT
CACCCTGATGTCATGCATATGTTTCTTCAAGTCCTGGATGATGGTCGCTTAACAGACGGACAAGGTCGCACAGTCAGCTT
CAAAGATACCATTATCATCATGACCTCAAATGCTGGAACAGGTAAAGTAGAAGCTAGCGTAGGCTTCGGTGCCTCTTTAG
AGGGACGCACGCACTCTGTCCTCGGTCAACTCAGCAACTTCTTCAGTCCAGAATTTATGAACCGTTTTGACGGCATTGTC
GAATTCCAAGCCCTCAGCAAGGAAAATCTCCTTCATATCGTGGATCTCATGCTTCTTGATATCAACGAACGTCTAAAGAC
CACAGGACTTACACTTCATGTGACCGATAAGGTAAAGGAAAAATTAGTTGATTTAGGCTATGATCCAAAAATGGGAGCTC
GTCCACTTCGCAGAACCATCCAAGAATATATCGAGGATCCACTGACAGACTTCTATCTGGAACATCCAGAAGAACAAAAT
CTACGCGCTGTCTTAACTAGCAAGGGTGCTATTGCCATAAAAGCAAAATAA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (289-387)

• ATPase family associated with various cellular activities (AAA) (AAA) (151-271)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (645-716)

• AAA domain (Cdc48 subfamily) (AAA_2) (474-637)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus pneumoniae Rx1	80.882	100	0.822
clpE	Streptococcus pneumoniae D39	80.882	100	0.822
clpE	Streptococcus pneumoniae R6	80.882	100	0.822
clpE	Streptococcus pneumoniae TIGR4	80.882	100	0.822
clpE	Streptococcus mutans UA159	80.754	100	0.815
clpC	Lactococcus lactis subsp. cremoris KW2	77.824	98.641	0.768
clpC	Bacillus subtilis subsp. subtilis str. 168	50.815	91.712	0.466
clpC	Streptococcus thermophilus LMD-9	47.582	87.092	0.414
clpC	Streptococcus thermophilus LMG 18311	48.077	84.783	0.408
clpC	Streptococcus mutans UA159	47.077	86.005	0.405
clpC	Streptococcus pneumoniae Rx1	47.2	84.918	0.401
clpC	Streptococcus pneumoniae D39	47.2	84.918	0.401
clpC	Streptococcus pneumoniae TIGR4	47.2	84.918	0.401
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.266	83.696	0.387