Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NC3_RS05195 Genome accession   NZ_AP025264
Coordinates   1035722..1036672 (+) Length   316 a.a.
NCBI ID   WP_035700170.1    Uniprot ID   A0AB39J2K1
Organism   Bacillus altitudinis strain NC3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1030722..1041672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NC3_RS05175 (NC3_09620) - 1031957..1032439 (+) 483 WP_017360234.1 hypothetical protein -
  NC3_RS05180 (NC3_09630) - 1032470..1033909 (-) 1440 WP_171465157.1 PLP-dependent aminotransferase family protein -
  NC3_RS05185 (NC3_09640) - 1034053..1035222 (+) 1170 WP_039963455.1 MFS transporter -
  NC3_RS05190 (NC3_09650) - 1035285..1035563 (+) 279 WP_025207101.1 barstar family protein -
  NC3_RS05195 (NC3_09660) ceuB 1035722..1036672 (+) 951 WP_035700170.1 ABC transporter permease Machinery gene
  NC3_RS05200 (NC3_09670) - 1036665..1037615 (+) 951 WP_017366965.1 iron chelate uptake ABC transporter family permease subunit -
  NC3_RS05205 (NC3_09680) - 1037606..1038364 (+) 759 WP_048002567.1 ABC transporter ATP-binding protein -
  NC3_RS05210 (NC3_09690) - 1038387..1039331 (+) 945 WP_116306677.1 siderophore ABC transporter substrate-binding protein -
  NC3_RS05215 (NC3_09700) - 1039470..1040426 (+) 957 WP_008348636.1 LCP family protein -
  NC3_RS05220 (NC3_09710) - 1040461..1040895 (-) 435 WP_116306680.1 enoyl-CoA hydratase -
  NC3_RS05225 (NC3_09720) - 1040981..1041343 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=90805 NC3_RS05195 WP_035700170.1 1035722..1036672(+) (ceuB) [Bacillus altitudinis strain NC3]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTLLTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=90805 NC3_RS05195 WP_035700170.1 1035722..1036672(+) (ceuB) [Bacillus altitudinis strain NC3]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGCTTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.667

94.937

0.491

Multiple sequence alignment