Detailed information NTG0908039

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: SOL79_RS10720
• Genome accession: NZ_CP139210
• Coordinates: 2460048..2461274 (+)
• Length: 408 a.a.
• NCBI ID: WP_135028342.1
• Uniprot ID: -
• Organism: Streptococcus sp. VEG1o
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2455048..2466274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOL79_RS10705 (SOL79_10680)	-	2458380..2459219 (+)	840	WP_135028348.1	thymidylate synthase	-
SOL79_RS10710 (SOL79_10685)	-	2459339..2459851 (+)	513	WP_135028346.1	dihydrofolate reductase	-
SOL79_RS10715 (SOL79_10690)	-	2459854..2460024 (+)	171	WP_135028344.1	hypothetical protein	-
SOL79_RS10720 (SOL79_10695)	clpX	2460048..2461274 (+)	1227	WP_135028342.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
SOL79_RS10725 (SOL79_10700)	yihA	2461284..2461871 (+)	588	WP_135028340.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
SOL79_RS10730 (SOL79_10705)	-	2462519..2462899 (+)	381	WP_135028338.1	hypothetical protein	-
SOL79_RS10735 (SOL79_10710)	rplJ	2463244..2463744 (+)	501	WP_075098255.1	50S ribosomal protein L10	-
SOL79_RS10740 (SOL79_10715)	rplL	2463819..2464187 (+)	369	WP_135028336.1	50S ribosomal protein L7/L12	-
SOL79_RS10745 (SOL79_10720)	-	2464386..2464559 (+)	174	WP_001168336.1	hypothetical protein	-
SOL79_RS10750 (SOL79_10725)	-	2464556..2465374 (+)	819	WP_000822785.1	replication initiator protein A	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 45584.24 Da
• Isoelectric Point: 4.6125

>NTDB_id=908039 SOL79_RS10720 WP_135028342.1 2460048..2461274(+) (clpX) [Streptococcus sp. VEG1o]
MTVHHPSELIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEIIREELAEEVLIDLAETPKPQELLTILNHYVIGQERA
KRALAVAVYNHYKRINFQDSREENDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQELIQLDTKN
ILFIVGGAFDGIEEIVKQRMGEKIIGFGHNNRAIDEKESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTIEDLIRIL
TEPKNALVKQYQTLLSYDGVELEFDREALEEIAKRAIERKTGARGLRSIIEETMLDIMFEVPSQDDIKRVRITKEAVDGQ
AQPILETA

Nucleotide

• Length: 1227 bp

>NTDB_id=908039 SOL79_RS10720 WP_135028342.1 2460048..2461274(+) (clpX) [Streptococcus sp. VEG1o]
ATGACAGTACATCATCCATCAGAGCTTATTTATTGCTCATTTTGTGGAAAAAATCAAGAAGAAGTAAAGAAAATTATTGC
AGGAAACAATGTATTTATTTGTAATGAATGTGTGGAATTGGCCCAGGAGATTATTCGCGAAGAATTAGCAGAAGAAGTCT
TGATAGACTTGGCTGAAACACCAAAACCACAGGAATTACTAACGATTTTAAACCACTATGTCATTGGTCAAGAGCGAGCT
AAGCGAGCCTTGGCAGTAGCTGTTTATAACCACTACAAACGAATCAATTTCCAAGATAGTCGAGAAGAAAATGATGTGGA
TTTACAAAAATCGAATATTCTCATGATTGGACCGACTGGTTCTGGCAAGACCTTCCTTGCTCAAACCTTGGCTAAAAGTC
TGAATGTCCCATTTGCTATTGCTGATGCAACGGCCTTGACAGAAGCGGGGTACGTAGGAGAAGATGTTGAAAATATCCTT
TTGAAATTGCTCCAGGCAGCTGATTTTAACATTGACCGCGCAGAGCGTGGCATTATTTATGTAGATGAAATTGATAAAAT
TGCTAAAAAAGGAGAAAATGTTTCTATTACGCGTGATGTTTCAGGAGAAGGTGTGCAGCAAGCACTTCTAAAAATTATTG
AGGGAACAGTAGCGAGCGTTCCACCACAAGGTGGTCGCAAGCATCCGCAGCAGGAACTGATTCAGTTGGATACTAAGAAT
ATTCTCTTTATCGTAGGGGGAGCCTTTGATGGTATCGAAGAAATCGTGAAGCAGCGTATGGGAGAAAAAATCATTGGTTT
CGGCCACAATAACCGTGCAATTGATGAAAAAGAATCGTATATGCAACACATCATTGCAGATGATATTCAAAAATTTGGTA
TTATTCCTGAGCTAATTGGTCGCTTACCTGTCTTTGCAGCTCTTGATCAGTTAACAATAGAAGATTTGATTCGCATTTTA
ACAGAGCCGAAAAACGCCCTTGTCAAACAATACCAAACCTTACTTTCTTATGATGGTGTCGAGTTAGAATTTGATAGGGA
AGCGCTGGAAGAAATTGCGAAACGAGCGATTGAACGCAAGACAGGAGCACGCGGTCTTCGCTCGATTATCGAAGAAACCA
TGCTTGATATTATGTTTGAAGTGCCGAGTCAAGATGATATTAAGCGCGTACGAATTACCAAAGAAGCAGTGGATGGACAA
GCTCAACCAATCCTAGAAACGGCATAA

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-47)

• AAA domain (Cdc48 subfamily) (AAA_2) (109-304)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	84.712	97.794	0.828
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	57.002	99.755	0.569