Detailed information NTG0908002

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: SOL79_RS05630
• Genome accession: NZ_CP139210
• Coordinates: 1313786..1314739 (-)
• Length: 317 a.a.
• NCBI ID: WP_135027174.1
• Uniprot ID: -
• Organism: Streptococcus sp. VEG1o
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1308786..1319739

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOL79_RS05610 (SOL79_05600)	-	1310060..1310623 (-)	564	WP_135027169.1	folate family ECF transporter S component	-
SOL79_RS05615 (SOL79_05605)	-	1310842..1311369 (-)	528	WP_135027213.1	ECF transporter S component	-
SOL79_RS05620 (SOL79_05610)	-	1311369..1312226 (-)	858	WP_135027171.1	pyridoxamine kinase	-
SOL79_RS05625 (SOL79_05615)	-	1312546..1313736 (-)	1191	WP_135027173.1	acetate kinase	-
SOL79_RS05630 (SOL79_05620)	comYH	1313786..1314739 (-)	954	WP_135027174.1	class I SAM-dependent methyltransferase	Machinery gene
SOL79_RS05635 (SOL79_05625)	comGG	1314762..1315157 (-)	396	WP_135027176.1	competence type IV pilus minor pilin ComGG	-
SOL79_RS05640 (SOL79_05630)	comYF	1315168..1315602 (-)	435	WP_135027179.1	competence type IV pilus minor pilin ComGF	Machinery gene
SOL79_RS05645 (SOL79_05635)	comYE	1315589..1315882 (-)	294	WP_135027181.1	competence type IV pilus minor pilin ComGE	Machinery gene
SOL79_RS05650 (SOL79_05640)	comGD	1315854..1316192 (-)	339	WP_410531030.1	competence type IV pilus minor pilin ComGD	-
SOL79_RS05655 (SOL79_05645)	comGC/cglC	1316242..1316556 (-)	315	WP_135027183.1	competence type IV pilus major pilin ComGC	Machinery gene
SOL79_RS05660 (SOL79_05650)	comYB	1316558..1317586 (-)	1029	WP_135027184.1	competence type IV pilus assembly protein ComGB	Machinery gene
SOL79_RS05665 (SOL79_05655)	comGA/cglA/cilD	1317507..1318457 (-)	951	WP_135027186.1	competence type IV pilus ATPase ComGA	Machinery gene
SOL79_RS05670 (SOL79_05660)	-	1318627..1318989 (-)	363	WP_135027188.1	DUF1033 family protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36064.06 Da
• Isoelectric Point: 4.5370

>NTDB_id=908002 SOL79_RS05630 WP_135027174.1 1313786..1314739(-) (comYH) [Streptococcus sp. VEG1o]
MNFEKIEQAYDLLLENVQTLQNLLGTNFYDALIEQNAAYLAGNHEHEVIVANIEALKQLQLTAEEWRRSYQFLFIKANQT
EPMQYNHQFTPDSIGFILTFLLDHLVSEKQVTVLEIGSGTGNLAQTILNHSQKKIDYLGIEVDDLLIDLSASIADVMESS
SHFAQGDAIRPQILKESQVIIGDLPIGYYPDDRIAQRYQVASSTEHTYAHHLLMEQSLKYLKQGGYAILLAPNDLLTSPQ
SPLLKAWLQDNARVVAVLTLPSNLFGTQLMAKTIFVLQKQTDMLVETFMYPLTDLQNLEELQQFTENFKKWKQDNAI

Nucleotide

• Length: 954 bp

>NTDB_id=908002 SOL79_RS05630 WP_135027174.1 1313786..1314739(-) (comYH) [Streptococcus sp. VEG1o]
ATGAATTTTGAAAAAATTGAACAGGCGTATGACTTGCTGTTAGAAAATGTCCAAACCCTCCAAAATCTTTTGGGAACAAA
CTTTTATGATGCTTTGATTGAGCAGAATGCTGCTTATTTGGCAGGCAACCATGAGCATGAAGTTATTGTTGCTAATATTG
AAGCTCTAAAGCAGTTGCAGTTGACGGCTGAGGAGTGGCGCAGGTCCTATCAATTTCTCTTTATCAAAGCTAATCAGACA
GAACCGATGCAGTACAATCATCAATTTACTCCAGACAGTATTGGCTTTATCTTGACCTTTCTGTTGGACCACTTGGTGAG
TGAGAAACAGGTTACTGTCTTGGAAATTGGTTCTGGAACTGGTAATCTGGCGCAAACAATTTTAAATCATAGCCAGAAAA
AAATTGACTATCTCGGCATTGAAGTGGATGATTTGTTGATTGACCTATCTGCAAGTATTGCGGATGTGATGGAAAGTAGT
AGCCATTTTGCTCAAGGAGATGCGATTCGTCCGCAGATTTTAAAAGAAAGTCAAGTCATCATTGGTGATTTACCAATTGG
TTACTATCCAGATGATCGCATAGCTCAGCGCTATCAAGTGGCAAGTTCAACAGAGCATACCTATGCTCATCACTTGTTGA
TGGAACAGTCCTTGAAATATTTAAAACAGGGTGGATATGCTATCTTACTTGCACCAAATGATTTACTGACCAGTCCTCAA
AGTCCGCTCTTGAAAGCTTGGTTACAAGATAATGCCAGAGTTGTTGCGGTACTGACCTTACCGTCTAATTTATTTGGGAC
ACAGCTGATGGCGAAAACGATTTTTGTATTACAGAAGCAGACGGATATGCTGGTAGAGACTTTTATGTATCCATTGACGG
ATTTACAAAATCTGGAAGAATTGCAACAGTTTACTGAGAATTTCAAAAAATGGAAACAAGATAATGCAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (70-299)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	63.924	99.685	0.637
comYH	Streptococcus mutans UA159	63.608	99.685	0.634