Detailed information NTG0907978

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABN568_RS23100
• Genome accession: NZ_CP158275
• Coordinates: 4791386..4792411 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC2257
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4786386..4797411

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABN568_RS23090 (ABN568_23070)	rpmE	4788617..4788829 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABN568_RS23095 (ABN568_23075)	priA	4789032..4791230 (+)	2199	WP_001590975.1	primosomal protein N'	Machinery gene
ABN568_RS23100 (ABN568_23080)	cytR	4791386..4792411 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABN568_RS23105 (ABN568_23085)	ftsN	4792503..4793462 (+)	960	WP_000068834.1	cell division protein FtsN	-
ABN568_RS23110 (ABN568_23090)	hslV	4793555..4794085 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABN568_RS23115 (ABN568_23095)	hslU	4794095..4795426 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ABN568_RS23120 (ABN568_23100)	menA	4795493..4796419 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABN568_RS23125 (ABN568_23105)	rraA	4796512..4796997 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABN568_RS23130 (ABN568_23110)	zapB	4797082..4797327 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=907978 ABN568_RS23100 WP_000644904.1 4791386..4792411(+) (cytR) [Escherichia coli strain EC2257]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=907978 ABN568_RS23100 WP_000644904.1 4791386..4792411(+) (cytR) [Escherichia coli strain EC2257]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628