Detailed information NTG0907917

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: SLP98_RS08295
• Genome accession: NZ_CP139204
• Coordinates: 1756107..1756808 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594588.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain HNZZ130D
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1751107..1761808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SLP98_RS08260 (SLP98_08260)	kdsB	1751630..1752391 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
SLP98_RS08265 (SLP98_08265)	-	1752403..1753383 (+)	981	WP_001075419.1	DNA polymerase III subunit delta'	-
SLP98_RS08270 (SLP98_08270)	-	1753395..1753736 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
SLP98_RS08275 (SLP98_08275)	-	1753754..1754527 (+)	774	WP_000497301.1	TatD family hydrolase	-
SLP98_RS08280 (SLP98_08280)	-	1754565..1755173 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
SLP98_RS08285 (SLP98_08285)	-	1755183..1755737 (+)	555	WP_000841372.1	type II secretion system protein	-
SLP98_RS08290 (SLP98_08290)	xcpV	1755727..1756107 (+)	381	WP_000836909.1	type II secretion system minor pseudopilin GspI	Machinery gene
SLP98_RS08295 (SLP98_08295)	xcpW	1756107..1756808 (+)	702	WP_000594588.1	type II secretion system minor pseudopilin GspJ	Machinery gene
SLP98_RS08300 (SLP98_08300)	gspK	1756808..1757767 (+)	960	WP_001218621.1	type II secretion system minor pseudopilin GspK	-
SLP98_RS08305 (SLP98_08305)	-	1757997..1758593 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
SLP98_RS08310 (SLP98_08310)	ung	1758644..1759357 (+)	714	WP_001177527.1	uracil-DNA glycosylase	-
SLP98_RS08315 (SLP98_08315)	-	1759354..1760478 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
SLP98_RS08320 (SLP98_08320)	tadA	1760485..1760988 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
SLP98_RS08325 (SLP98_08325)	-	1761058..1761501 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26625.55 Da
• Isoelectric Point: 9.3468

>NTDB_id=907917 SLP98_RS08295 WP_000594588.1 1756107..1756808(+) (xcpW) [Acinetobacter baumannii strain HNZZ130D]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQDGNS

Nucleotide

• Length: 702 bp

>NTDB_id=907917 SLP98_RS08295 WP_000594588.1 1756107..1756808(+) (xcpW) [Acinetobacter baumannii strain HNZZ130D]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGACGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991