Detailed information NTG0907811

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: SK095_RS13540
• Genome accession: NZ_CP139195
• Coordinates: 2883024..2884301 (-)
• Length: 425 a.a.
• NCBI ID: WP_320546582.1
• Uniprot ID: -
• Organism: Pseudomonas sp. AN-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2878024..2889301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SK095_RS13510 (SK095_13510)	thiS	2878784..2878984 (-)	201	WP_320546580.1	sulfur carrier protein ThiS	-
SK095_RS13515 (SK095_13515)	-	2879065..2879445 (-)	381	WP_136490441.1	DUF423 domain-containing protein	-
SK095_RS13520 (SK095_13520)	mtgA	2879588..2880292 (+)	705	WP_136490440.1	monofunctional biosynthetic peptidoglycan transglycosylase	-
SK095_RS13525 (SK095_13525)	rpoH	2880355..2881209 (-)	855	WP_136490439.1	RNA polymerase sigma factor RpoH	-
SK095_RS13530 (SK095_13530)	ftsX	2881349..2882359 (-)	1011	WP_136490438.1	permease-like cell division protein FtsX	-
SK095_RS13535 (SK095_13535)	ftsE	2882359..2883027 (-)	669	WP_320546581.1	cell division ATP-binding protein FtsE	-
SK095_RS13540 (SK095_13540)	pilA	2883024..2884301 (-)	1278	WP_320546582.1	signal recognition particle-docking protein FtsY	Machinery gene
SK095_RS13545 (SK095_13545)	-	2884427..2885794 (+)	1368	WP_320546583.1	pitrilysin family protein	-
SK095_RS13550 (SK095_13550)	-	2885787..2887280 (+)	1494	WP_320546584.1	pitrilysin family protein	-
SK095_RS13555 (SK095_13555)	rsmD	2887280..2887903 (+)	624	WP_320546585.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-

Sequence

Protein

• Length: 425 a.a.
• Molecular weight: 44191.70 Da
• Isoelectric Point: 5.2306

>NTDB_id=907811 SK095_RS13540 WP_320546582.1 2883024..2884301(-) (pilA) [Pseudomonas sp. AN-1]
MFGSKDDKKTPDAGEKKGLFGWFRKKAQPEAVEQPVAELEPAAAEPSGAVPASEPAAAVTAAEPAASPSVAPVQAEAPVA
APSAPVAVPPPAPAARPEPLAEPVAAAPVAAEKPAKLGFFARLKQGLAKTSASIGEGMASLFLGKKAIDDDLLDELETRL
LTADVGVEATSAIMQSLTRRVSRKELADSDALYQALQEELAAILRPVEQPLAIEAGRKPYVILVVGVNGAGKTTTIGKLA
KKLQDEGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAQARGIDVLIADTAGRLHTKDNLM
EELKKVRRVIGKLDESAPHETLLVLDAGTGQNALSQARLFHQAVSLSGLALTKLDGTAKGGVIFALAKQMALPIRYVGVG
EGIDDLRPFEAEAFVKALFAGQESA

Nucleotide

• Length: 1278 bp

>NTDB_id=907811 SK095_RS13540 WP_320546582.1 2883024..2884301(-) (pilA) [Pseudomonas sp. AN-1]
ATGTTTGGTTCCAAAGACGACAAGAAGACTCCGGATGCCGGAGAAAAGAAAGGCCTGTTCGGCTGGTTCCGCAAGAAGGC
GCAACCTGAGGCCGTCGAGCAGCCGGTGGCCGAACTCGAGCCGGCTGCAGCTGAGCCGTCGGGGGCGGTGCCGGCGTCTG
AGCCCGCAGCGGCAGTGACCGCAGCCGAGCCGGCCGCCTCCCCCAGCGTGGCTCCGGTCCAGGCCGAAGCCCCGGTCGCC
GCCCCGTCCGCCCCGGTTGCCGTGCCGCCGCCGGCACCCGCTGCCAGGCCCGAGCCGCTGGCGGAGCCCGTGGCCGCGGC
CCCGGTGGCCGCGGAGAAGCCTGCCAAGCTCGGCTTCTTCGCCCGTCTCAAGCAGGGCCTGGCCAAGACCAGCGCCAGCA
TCGGCGAGGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGACCTGCTCGACGAGCTGGAGACCCGCCTG
CTGACCGCCGACGTCGGCGTCGAGGCGACCAGCGCGATCATGCAGAGCCTGACCAGGCGCGTGTCGCGCAAGGAGCTGGC
CGACAGCGACGCGCTGTACCAGGCGCTGCAGGAGGAGCTGGCCGCCATCCTGCGCCCGGTCGAGCAGCCGCTGGCGATCG
AGGCCGGCCGCAAGCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGCCGGCAAGACCACCACCATCGGCAAGCTGGCC
AAGAAGCTGCAGGACGAGGGCAAGAAGGTCATGCTCGCCGCCGGCGACACCTTCCGCGCCGCCGCCGTCGAGCAGCTGCA
GGTGTGGGGCGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCCGATTCCGCCTCGGTGATCTTCGACGCGG
TGCAGGCCGCCCAGGCGCGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTGATG
GAGGAGCTGAAGAAGGTCCGTCGGGTGATCGGCAAGCTCGACGAGAGCGCGCCGCACGAGACCCTGCTGGTGCTGGATGC
CGGCACCGGACAGAACGCCCTCAGCCAGGCGCGCCTGTTCCACCAGGCGGTCAGCCTCAGTGGCCTGGCGCTGACCAAGC
TGGACGGCACCGCCAAGGGCGGGGTGATCTTCGCCCTGGCCAAGCAGATGGCGCTGCCGATCCGCTACGTTGGCGTCGGC
GAGGGCATCGACGACCTGCGTCCGTTCGAGGCCGAGGCCTTCGTCAAGGCGCTGTTCGCAGGACAGGAGAGCGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (135-200)

• SRP54-type protein, GTPase domain (SRP54) (220-419)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.926	98.588	0.482