Detailed information NTG0907760

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: SK061_RS21835
• Genome accession: NZ_CP139190
• Coordinates: 4180240..4181397 (-)
• Length: 385 a.a.
• NCBI ID: WP_006639267.1
• Uniprot ID: M5P1Q6
• Organism: Bacillus sonorensis strain PMC204
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4175240..4186397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SK061_RS21805 (SK061_21805)	-	4175459..4175878 (-)	420	WP_006639262.1	TIGR03826 family flagellar region protein	-
SK061_RS21810 (SK061_21810)	comFC	4175936..4176670 (-)	735	WP_006639263.1	ComF family protein	Machinery gene
SK061_RS21815 (SK061_21815)	-	4176627..4176911 (-)	285	WP_006639264.1	late competence development ComFB family protein	-
SK061_RS21820 (SK061_21820)	comFA	4176968..4178314 (-)	1347	WP_006639265.1	DEAD/DEAH box helicase	Machinery gene
SK061_RS21825 (SK061_21825)	-	4178507..4179349 (-)	843	WP_006639266.1	DegV family protein	-
SK061_RS21830 (SK061_21830)	degU	4179469..4180158 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
SK061_RS21835 (SK061_21835)	degS	4180240..4181397 (-)	1158	WP_006639267.1	histidine kinase	Regulator
SK061_RS21840 (SK061_21840)	-	4181619..4182257 (+)	639	WP_006639268.1	YigZ family protein	-
SK061_RS21845 (SK061_21845)	-	4182274..4183353 (+)	1080	WP_006639269.1	LCP family protein	-
SK061_RS21850 (SK061_21850)	-	4183496..4184560 (-)	1065	WP_006639270.1	glycosyltransferase family 4 protein	-
SK061_RS21855 (SK061_21855)	tuaH	4184683..4185864 (-)	1182	WP_006639271.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44603.33 Da
• Isoelectric Point: 7.0403

>NTDB_id=907760 SK061_RS21835 WP_006639267.1 4180240..4181397(-) (degS) [Bacillus sonorensis strain PMC204]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEAEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFHCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEAKSKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=907760 SK061_RS21835 WP_006639267.1 4180240..4181397(-) (degS) [Bacillus sonorensis strain PMC204]
GTGAGTGTTTCCAAAATGGACTCCAAAGTCTTAGATTCAATTATTATGAAAATGTTAAAAACCGTGGACGGGAGCAAAGA
TGAAGTCTTTCAAATCGGCGAACAATCCCGCCAGCAATATGAAGGCTTGGTGGAAGAGCTGAAGCAGATAAAGCAGCAGG
TCAACGAAGTCATTGATCTCGGAGACAGATTAGAGGTACATGCCAGGCATGCGAGGAACCGTTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGCGGAAATTCGCGAAGCTTATGAAAAGGCGCACAAACTTCAAGTAGAGCTGACGATGAT
TCAGCAGCGCGAAAAACAGCTTAGAGAGAAACGCGACGATCTGGAAAGGCGCCTCCTTGGCCTTCAGGAAATCATTGAAC
GTTCCGAAGGGCTTGTCAGTCAAATTACAGTTGTCTTAAACTATTTAAACCAAGACTTGCGCCAAGTTGGCGTTTTATTG
GAAGATGCACAGGCAAAACAGGATTTCGGTCTTCGAATTATCGAAGCGCAGGAAGAAGAAAGAAAAAGAGTGTCGCGTGA
GATTCACGACGGCCCAGCGCAAATGCTGGCAAATGTGATGATGAGATCGGAATTGATAGAACGGATATTCAGGGACAAGG
GAACGGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTTCGAAATGCCCTTTATGAAGTCAGACGGATCATA
TATGATTTAAGGCCGATGGCTTTAGATGACCTGGGGCTAATTCCGACGCTCAGAAAGTATTTGAACACAATCGAAGATTA
TCATGGGAAAGCGAAAATTCATTTCCATTGTATCGGGGAATCTGAAGAAAGACGAATTGCACCGCGCTTTGAGGTGGCGC
TTTTCAGGCTTGCTCAAGAAGCGGTCACAAATGCCCTGAAACATTCCGAATCGACCGAAATTCATGTTAAAGTAGAAGTA
ACGAAAGATTTTGTTACTCTGATTATAAAGGATAACGGAAACGGCTTTGATTTAAAAGAAGCGAAAAGCAAGAAAAACAA
ATCTTTCGGTCTGCTCGGGATGAAGGAAAGAGTCGATTTGCTTGAAGGGACAATGACGATTGATTCAAAAATAGGTCTCG
GGACATTTATTTTGATTAAAGTTCCGCTTTCATTGTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: M5P1Q6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894