Detailed information NTG0907739

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: SK061_RS16015
• Genome accession: NZ_CP139190
• Coordinates: 3101048..3103378 (-)
• Length: 776 a.a.
• NCBI ID: WP_006637630.1
• Uniprot ID: M5P6B2
• Organism: Bacillus sonorensis strain PMC204
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3096048..3108378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SK061_RS15985 (SK061_15985)	-	3096249..3096572 (-)	324	WP_006637624.1	YqxA family protein	-
SK061_RS15990 (SK061_15990)	spoIIP	3096590..3097792 (-)	1203	WP_006637625.1	stage II sporulation protein P	-
SK061_RS15995 (SK061_15995)	gpr	3097927..3099033 (-)	1107	WP_006637626.1	GPR endopeptidase	-
SK061_RS16000 (SK061_16000)	rpsT	3099239..3099505 (+)	267	WP_006637627.1	30S ribosomal protein S20	-
SK061_RS16005 (SK061_16005)	holA	3099553..3100593 (-)	1041	WP_006637628.1	DNA polymerase III subunit delta	-
SK061_RS16010 (SK061_16010)	-	3100826..3100957 (+)	132	WP_006637629.1	YqzM family protein	-
SK061_RS16015 (SK061_16015)	comEC	3101048..3103378 (-)	2331	WP_006637630.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SK061_RS16020 (SK061_16020)	-	3103385..3103954 (-)	570	WP_006637631.1	ComE operon protein 2	-
SK061_RS16025 (SK061_16025)	comEA	3104022..3104645 (-)	624	WP_373926326.1	helix-hairpin-helix domain-containing protein	Machinery gene
SK061_RS16030 (SK061_16030)	comER	3104732..3105553 (+)	822	WP_006637633.1	late competence protein ComER	-
SK061_RS16035 (SK061_16035)	-	3105621..3106376 (-)	756	WP_006637634.1	class I SAM-dependent methyltransferase	-
SK061_RS16040 (SK061_16040)	rsfS	3106376..3106729 (-)	354	WP_006637635.1	ribosome silencing factor	-
SK061_RS16045 (SK061_16045)	yqeK	3106743..3107306 (-)	564	WP_006637636.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
SK061_RS16050 (SK061_16050)	-	3107296..3107865 (-)	570	WP_006637637.1	nicotinate-nucleotide adenylyltransferase	-
SK061_RS16055 (SK061_16055)	yhbY	3107884..3108174 (-)	291	WP_006637638.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 85558.84 Da
• Isoelectric Point: 9.5265

>NTDB_id=907739 SK061_RS16015 WP_006637630.1 3101048..3103378(-) (comEC) [Bacillus sonorensis strain PMC204]
MGLLYRILPCGAISAAAGIASAQSSSFLPLIIFLSLLFIFSQIKKQFLLFFICTVICGFYMIYFMAIDSSNTTRYKEGAF
RAYMSVRDIPRIDGDRLAFTAEMAEGEAVKANYILQSPQEKAALSKLEPGSTCFMTGVLKTPKRATVPGTFDRKEYLRQQ
GIHWNFAVQSIKGCQSGGGPASFLLKIRKAGLGFIEKHVPETSAGIVQALVFGDRFLIEQDVLDGYQSLGIIHLLAISGL
HVGILSAVLFYMLLRIGITREHAKWCLIMMLPAAVMLTGAAPSVLRAAFMSEIYLLSSLFKNRLRGAQVLSIAWLGLLLF
NPYMLFQAGFQLSFAASFVFILSKEILLKPKHQTVRLLLASFVAQLGSLPILLFHFQEVSFLSVLMNLCFVPFYVFIVMP
LSFGGLLILLVAPPLGNLAMGVLDWLLGWSHWAVKAASSLEIFTFSAVKPDVIHLLFYIASICVLLMSIEKAISCKTLAI
PACLLASAFLFHAAAPHFIGSGEVTMLDVGQGDSIYISAPGQKGNVLIDTGGIVSFKKEAWRERKKDVSLGERVLIPFLA
SKGVKQLDALILTHADHDHMGEAEILIGKNKVKQLIVPKGYAAEPADEKLLRFALERGVDVKTAKRGDRLVIGDLVFYVL
SPETADKNSKNNSSLVLWMNAGGFSWLLTGDLEKEGEREMLKAYPRLKADILKVGHHGSKGSTGEELINRIEPKAALISA
GENNRYRHPHKEVLEILKRHQVKVFRTDRDGAVQYLFGRGDGTFLLHPPYDKVYSP

Nucleotide

• Length: 2331 bp

>NTDB_id=907739 SK061_RS16015 WP_006637630.1 3101048..3103378(-) (comEC) [Bacillus sonorensis strain PMC204]
ATGGGTCTTCTCTACCGCATCCTTCCCTGCGGAGCAATTTCAGCAGCAGCCGGAATTGCTTCCGCCCAATCTTCTTCTTT
TCTCCCCCTCATCATCTTTTTAAGTCTGCTTTTCATCTTCAGTCAGATCAAGAAGCAATTTCTCCTTTTTTTCATTTGTA
CAGTCATCTGCGGTTTTTATATGATTTATTTTATGGCCATTGACAGTTCGAATACGACTCGCTACAAGGAAGGCGCTTTC
CGTGCGTACATGTCTGTTCGCGATATTCCGAGAATAGACGGGGACCGTCTCGCTTTCACTGCCGAAATGGCTGAAGGAGA
AGCGGTGAAAGCGAACTACATCCTTCAGTCTCCACAGGAAAAAGCGGCGCTTTCGAAGCTTGAGCCGGGCAGTACATGTT
TCATGACAGGCGTATTAAAAACTCCTAAGAGAGCAACTGTACCCGGGACGTTTGATCGTAAAGAATATCTGCGCCAGCAG
GGCATTCACTGGAATTTTGCGGTTCAGTCGATCAAAGGCTGTCAGTCAGGAGGCGGTCCGGCTTCATTTTTGCTGAAAAT
CCGAAAAGCCGGTCTTGGTTTTATAGAGAAACATGTGCCTGAAACATCTGCGGGTATTGTACAGGCGCTGGTTTTCGGCG
ACAGGTTTCTGATTGAGCAGGACGTGCTGGACGGATATCAAAGCCTCGGGATCATCCATCTTCTAGCCATTTCAGGTCTC
CATGTAGGCATACTTTCGGCCGTTTTATTTTACATGCTGCTCCGGATCGGGATAACGAGGGAACATGCAAAATGGTGCTT
GATCATGATGCTTCCAGCCGCGGTTATGCTGACAGGCGCAGCTCCCTCGGTGCTTAGAGCGGCGTTCATGTCTGAAATAT
ATTTGCTTTCTTCATTGTTCAAGAATCGTTTAAGAGGCGCGCAGGTTCTCAGCATTGCCTGGCTCGGTCTATTGTTATTC
AACCCCTATATGCTTTTCCAGGCAGGTTTTCAGCTTTCTTTTGCAGCATCCTTCGTGTTTATTCTTTCAAAAGAAATACT
TTTAAAACCTAAACATCAAACCGTCAGGCTGCTGTTGGCTTCTTTTGTGGCCCAGCTCGGTTCACTTCCGATTCTTCTCT
TTCACTTTCAAGAGGTTTCCTTCCTCAGTGTCCTCATGAATCTATGTTTTGTACCGTTTTATGTGTTCATCGTGATGCCG
CTGTCATTTGGCGGGTTATTGATTTTGTTGGTTGCGCCTCCTCTTGGGAATCTTGCAATGGGCGTGCTTGACTGGCTGCT
CGGATGGAGCCATTGGGCGGTAAAAGCGGCGTCTTCCCTTGAGATCTTCACGTTCTCCGCTGTTAAACCCGATGTCATCC
ATTTGCTTTTTTATATAGCTTCAATATGTGTCCTTCTGATGTCTATCGAAAAAGCAATCTCTTGCAAAACGCTCGCCATT
CCGGCTTGTCTGCTTGCTTCCGCTTTTCTGTTTCACGCCGCTGCCCCGCATTTCATCGGTTCAGGAGAAGTGACAATGCT
TGATGTCGGGCAGGGAGACAGCATATATATCAGCGCTCCGGGGCAAAAGGGAAATGTTTTAATTGATACCGGAGGGATTG
TTTCCTTTAAAAAGGAGGCATGGCGGGAAAGAAAAAAAGATGTATCCTTGGGAGAAAGAGTATTAATCCCCTTTCTTGCT
TCAAAAGGCGTTAAACAACTTGATGCTTTGATTTTGACGCATGCCGATCATGATCATATGGGAGAGGCTGAAATTCTGAT
CGGGAAAAATAAGGTGAAACAATTGATTGTGCCGAAAGGATATGCGGCAGAACCGGCAGATGAAAAGCTCCTCCGTTTTG
CTCTGGAAAGGGGAGTGGATGTGAAAACGGCAAAGAGAGGGGACCGCTTGGTCATTGGTGATCTGGTGTTTTATGTTCTT
TCGCCGGAAACGGCAGACAAAAACAGCAAAAACAACAGTTCCCTCGTTTTATGGATGAACGCTGGAGGCTTCAGCTGGCT
TTTAACAGGCGATTTGGAAAAGGAAGGCGAGCGGGAGATGCTCAAAGCCTATCCAAGGCTGAAAGCCGACATTCTTAAAG
TCGGCCACCATGGGAGCAAAGGATCGACAGGAGAGGAGCTGATCAACCGTATCGAACCGAAAGCGGCCCTCATATCGGCG
GGGGAAAACAATCGCTACCGCCATCCCCACAAAGAGGTGCTGGAGATTTTAAAACGCCATCAGGTCAAGGTGTTCAGGAC
AGACCGGGACGGAGCGGTTCAGTACCTATTTGGAAGAGGGGACGGAACGTTTTTGCTCCATCCTCCATATGATAAAGTAT
ATTCCCCGTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-721)

• Competence protein (Competence) (210-470)

• Domain of unknown function (DUF4131) (DUF4131) (28-171)

3D structure

• AlphaFold DB: M5P6B2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	49.347	98.711	0.487