Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   SK061_RS07235 Genome accession   NZ_CP139190
Coordinates   1418902..1419090 (+) Length   62 a.a.
NCBI ID   WP_006636820.1    Uniprot ID   M5P9H2
Organism   Bacillus sonorensis strain PMC204     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1413902..1424090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SK061_RS07205 (SK061_07205) argF 1414693..1415643 (+) 951 WP_006636814.1 ornithine carbamoyltransferase -
  SK061_RS07210 (SK061_07210) - 1415777..1415956 (+) 180 WP_006636815.1 YjzC family protein -
  SK061_RS07215 (SK061_07215) - 1416036..1416221 (-) 186 WP_006636816.1 YjzD family protein -
  SK061_RS07220 (SK061_07220) - 1416460..1417194 (+) 735 WP_006636817.1 hypothetical protein -
  SK061_RS07225 (SK061_07225) - 1417286..1417858 (+) 573 WP_006636818.1 hypothetical protein -
  SK061_RS07230 (SK061_07230) med 1417944..1418912 (+) 969 WP_006636819.1 BMP family ABC transporter substrate-binding protein Regulator
  SK061_RS07235 (SK061_07235) comZ 1418902..1419090 (+) 189 WP_006636820.1 ComZ family protein Regulator
  SK061_RS07240 (SK061_07240) - 1419134..1419385 (-) 252 WP_006636821.1 hypothetical protein -
  SK061_RS07245 (SK061_07245) - 1419555..1420493 (+) 939 WP_006636822.1 beta-ketoacyl-ACP synthase III -
  SK061_RS07250 (SK061_07250) fabF 1420515..1421753 (+) 1239 WP_006636823.1 beta-ketoacyl-ACP synthase II -
  SK061_RS07255 (SK061_07255) - 1421834..1422622 (+) 789 WP_006636824.1 DUF2268 domain-containing protein -
  SK061_RS07260 (SK061_07260) - 1422801..1423775 (+) 975 WP_006636825.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7047.14 Da        Isoelectric Point: 4.2412

>NTDB_id=907715 SK061_RS07235 WP_006636820.1 1418902..1419090(+) (comZ) [Bacillus sonorensis strain PMC204]
MQHEKSMEFLQIAMKYVPEAKEEMEKAGIELSPEMLQPFMTLFTKVMAEAYELGKTDAGSDS

Nucleotide


Download         Length: 189 bp        

>NTDB_id=907715 SK061_RS07235 WP_006636820.1 1418902..1419090(+) (comZ) [Bacillus sonorensis strain PMC204]
ATGCAGCATGAAAAATCAATGGAATTTTTACAAATCGCCATGAAATACGTGCCGGAAGCAAAGGAAGAAATGGAGAAGGC
GGGAATTGAGCTCTCGCCGGAGATGCTTCAGCCGTTTATGACGCTGTTTACCAAAGTGATGGCGGAAGCGTACGAACTTG
GCAAAACGGATGCTGGATCAGATTCTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M5P9H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

77.419

100

0.774