Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   SIS06_RS04895 Genome accession   NZ_CP139188
Coordinates   931026..931820 (+) Length   264 a.a.
NCBI ID   WP_283934170.1    Uniprot ID   -
Organism   Bacillus subtilis strain H17-16     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 926026..936820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SIS06_RS04865 (SIS06_04865) sxzA 926866..927897 (+) 1032 WP_283934168.1 FecCD family ABC transporter permease -
  SIS06_RS04870 (SIS06_04870) yfhB 928012..928893 (+) 882 WP_283934169.1 PhzF family phenazine biosynthesis isomerase -
  SIS06_RS04875 (SIS06_04875) yfhC 928981..929565 (+) 585 WP_003243940.1 nitroreductase -
  SIS06_RS04880 (SIS06_04880) yfhD 929604..929795 (-) 192 WP_003233561.1 YfhD family protein -
  SIS06_RS04885 (SIS06_04885) yfhE 929862..929972 (-) 111 WP_003223230.1 YfhE family protein -
  SIS06_RS04890 (SIS06_04890) yfhF 930026..930937 (-) 912 WP_161986661.1 TIGR01777 family oxidoreductase -
  SIS06_RS04895 (SIS06_04895) recX 931026..931820 (+) 795 WP_283934170.1 recombination regulator RecX Regulator
  SIS06_RS04900 (SIS06_04900) yfhH 931822..932136 (+) 315 WP_003244592.1 YfhH family protein -
  SIS06_RS04905 (SIS06_04905) yfhI 932279..933472 (+) 1194 WP_080474520.1 MFS transporter -
  SIS06_RS04910 (SIS06_04910) sspK 933504..933656 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  SIS06_RS04915 (SIS06_04915) yfhJ 933781..934050 (+) 270 WP_003243789.1 YfhJ family protein -
  SIS06_RS04920 (SIS06_04920) yfhK 934195..934713 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  SIS06_RS04925 (SIS06_04925) spdL 934798..935130 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  SIS06_RS04930 (SIS06_04930) ephM 935117..935977 (+) 861 WP_003233547.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31033.29 Da        Isoelectric Point: 6.5251

>NTDB_id=907605 SIS06_RS04895 WP_283934170.1 931026..931820(+) (recX) [Bacillus subtilis strain H17-16]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDYLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=907605 SIS06_RS04895 WP_283934170.1 931026..931820(+) (recX) [Bacillus subtilis strain H17-16]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACTATTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATAAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

98.864

100

0.989