Detailed information NTG0907508

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABMY59_RS00595
• Genome accession: NZ_CP158140
• Coordinates: 137793..138818 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain FDN-9
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 132793..143818

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABMY59_RS00575 (ABMY59_00575)	metJ	133854..134171 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ABMY59_RS00580 (ABMY59_00580)	yiiX	134355..134963 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ABMY59_RS00585 (ABMY59_00585)	rpmE	135024..135236 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABMY59_RS00590 (ABMY59_00590)	priA	135439..137637 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ABMY59_RS00595 (ABMY59_00595)	cytR	137793..138818 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABMY59_RS00600 (ABMY59_00600)	ftsN	138910..139869 (+)	960	WP_000068828.1	cell division protein FtsN	-
ABMY59_RS00605 (ABMY59_00605)	hslV	139962..140492 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABMY59_RS00610 (ABMY59_00610)	hslU	140502..141833 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABMY59_RS00615 (ABMY59_00615)	menA	141900..142826 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABMY59_RS00620 (ABMY59_00620)	rraA	142919..143404 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABMY59_RS00625 (ABMY59_00625)	zapB	143489..143734 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=907508 ABMY59_RS00595 WP_000644904.1 137793..138818(+) (cytR) [Escherichia coli strain FDN-9]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=907508 ABMY59_RS00595 WP_000644904.1 137793..138818(+) (cytR) [Escherichia coli strain FDN-9]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628