Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   TM2_RS05620 Genome accession   NZ_AP025262
Coordinates   1120737..1120934 (+) Length   65 a.a.
NCBI ID   WP_024720057.1    Uniprot ID   -
Organism   Bacillus altitudinis strain TM2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1115737..1125934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TM2_RS05590 (TM2_10410) - 1116137..1116316 (+) 180 WP_008348517.1 YjzC family protein -
  TM2_RS05595 (TM2_10430) - 1116486..1117751 (+) 1266 WP_236810374.1 MFS transporter -
  TM2_RS05600 (TM2_10440) - 1117871..1118065 (-) 195 WP_008348514.1 YjzD family protein -
  TM2_RS05605 (TM2_10450) - 1118278..1119018 (+) 741 WP_007499048.1 hypothetical protein -
  TM2_RS05610 (TM2_10460) - 1119094..1119669 (+) 576 WP_138825540.1 nad binding enzyme -
  TM2_RS05615 (TM2_10470) med 1119760..1120725 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  TM2_RS05620 (TM2_10480) comZ 1120737..1120934 (+) 198 WP_024720057.1 ComZ family protein Regulator
  TM2_RS05625 (TM2_10490) - 1121137..1121370 (-) 234 WP_008348506.1 hypothetical protein -
  TM2_RS05630 (TM2_10500) - 1121540..1122478 (+) 939 WP_024720058.1 beta-ketoacyl-ACP synthase III -
  TM2_RS05635 (TM2_10510) fabF 1122500..1123741 (+) 1242 WP_060780964.1 beta-ketoacyl-ACP synthase II -
  TM2_RS05640 (TM2_10520) - 1123819..1124613 (+) 795 WP_236810375.1 DUF2268 domain-containing protein -
  TM2_RS05645 (TM2_10530) - 1124784..1125764 (+) 981 WP_017367010.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7319.36 Da        Isoelectric Point: 4.2259

>NTDB_id=90748 TM2_RS05620 WP_024720057.1 1120737..1120934(+) (comZ) [Bacillus altitudinis strain TM2]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=90748 TM2_RS05620 WP_024720057.1 1120737..1120934(+) (comZ) [Bacillus altitudinis strain TM2]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCAGAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment