Detailed information NTG0907470

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: SKB18_RS07835
• Genome accession: NZ_CP139163
• Coordinates: 1601262..1602311 (+)
• Length: 349 a.a.
• NCBI ID: WP_012775295.1
• Uniprot ID: A0A2K1T047
• Organism: Streptococcus suis strain cnzyss2-311
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1596262..1607311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SKB18_RS07800	-	1596566..1597660 (+)	1095	WP_012027602.1	sensor histidine kinase	-
SKB18_RS07805	-	1597657..1598259 (+)	603	WP_012027601.1	response regulator transcription factor	-
SKB18_RS07810	-	1598567..1598785 (+)	219	WP_004194736.1	YqgQ family protein	-
SKB18_RS07815	-	1598785..1599171 (+)	387	WP_004194735.1	rhodanese-like domain-containing protein	-
SKB18_RS07820	-	1599228..1599950 (+)	723	WP_012027598.1	lipoprotein	-
SKB18_RS07825	rsmD	1600258..1600797 (+)	540	WP_009910569.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
SKB18_RS07830	coaD	1600787..1601275 (+)	489	WP_012027597.1	pantetheine-phosphate adenylyltransferase	-
SKB18_RS07835	sepM	1601262..1602311 (+)	1050	WP_012775295.1	SepM family pheromone-processing serine protease	Regulator
SKB18_RS07840	-	1602499..1603140 (+)	642	WP_012027595.1	YutD-like domain-containing protein	-
SKB18_RS07845	rlmN	1603149..1604261 (+)	1113	WP_012028433.1	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	-
SKB18_RS07850	-	1604258..1604785 (+)	528	WP_012027591.1	VanZ family protein	-
SKB18_RS07855	nadE	1606081..1606905 (-)	825	WP_004194617.1	ammonia-dependent NAD(+) synthetase	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37761.83 Da
• Isoelectric Point: 4.6112

>NTDB_id=907470 SKB18_RS07835 WP_012775295.1 1601262..1602311(+) (sepM) [Streptococcus suis strain cnzyss2-311]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTVRSSEEMTGGADNEEYFRIARFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALTDDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLEVGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSIPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKKNPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide

• Length: 1050 bp

>NTDB_id=907470 SKB18_RS07835 WP_012775295.1 1601262..1602311(+) (sepM) [Streptococcus suis strain cnzyss2-311]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATCTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAGGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAGTTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAGGAGTATTTCCGTATAGCACGGTTTTACAT
GGAGACATCGCAAAATATGGCGAAGTACCAAGGTTTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTGCTTGCCTTGACGGATGATTCAACCTTTAAAAAAGTTCTTAATATTGCCGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGAGGTTGGAAGTGATGTAACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAGATTATCAAATTGTCTAATGGCAAAAACGGGATAGGTATCACTCTCGTAG
ATCATACAGAGGTTCAAAGTTCGATTCCGATTGATTTCCAAACAGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGGATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTCATTTCGGCAGCTAAGTCTGGTGCAAGTATCTTTTTTG
TACCAAACAATCCAGTTGATGTAGAAGTTTTGAAGAAAAATCCAAAGGCTAAAACGAACTATGAAGAAGCTAAGGAAGCA
GCCGAGAAAGCAGGTCTAGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACAAA
GGGCGAGTAA

Domains

Predicted by InterproScan.

• PDZ domain (PDZ_2) (132-195)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-315)

3D structure

• AlphaFold DB: A0A2K1T047

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	60.807	99.427	0.605