Detailed information NTG0907445

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: SKB18_RS04725
• Genome accession: NZ_CP139163
• Coordinates: 990604..991557 (-)
• Length: 317 a.a.
• NCBI ID: WP_011922562.1
• Uniprot ID: -
• Organism: Streptococcus suis strain cnzyss2-311
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 985604..996557

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SKB18_RS04705	pepA	986080..987141 (+)	1062	WP_011921730.1	glutamyl aminopeptidase	-
SKB18_RS04710	-	987189..988445 (-)	1257	WP_011921729.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
SKB18_RS04715	-	988501..989052 (-)	552	WP_012774908.1	folate family ECF transporter S component	-
SKB18_RS04720	-	989367..990554 (-)	1188	WP_012775422.1	acetate kinase	-
SKB18_RS04725	comYH	990604..991557 (-)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
SKB18_RS04730	comGG	991614..992024 (-)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	-
SKB18_RS04735	comGF/cglF	992002..992436 (-)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
SKB18_RS04740	comYE	992423..992716 (-)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
SKB18_RS04745	comGD	992688..993095 (-)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	-
SKB18_RS04750	comYC	993076..993357 (-)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
SKB18_RS04755	comYB	993359..994396 (-)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
SKB18_RS04760	comYA	994308..995258 (-)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
SKB18_RS04765	-	995344..996287 (+)	944	Protein_927	S66 peptidase family protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35776.92 Da
• Isoelectric Point: 4.5177

>NTDB_id=907445 SKB18_RS04725 WP_011922562.1 990604..991557(-) (comYH) [Streptococcus suis strain cnzyss2-311]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNATYVAGQHETDLVVKNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPKEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKTAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI

Nucleotide

• Length: 954 bp

>NTDB_id=907445 SKB18_RS04725 WP_011922562.1 990604..991557(-) (comYH) [Streptococcus suis strain cnzyss2-311]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACTAA
TATCTATGATGCCATGATTGAGCAAAATGCTACTTACGTAGCTGGTCAGCATGAGACGGATCTTGTTGTCAAAAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTATCAATTCTTGCTCATCAAGGCCAATCAGACT
GAGCCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTATTTGGGGATCGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGTCCAAAGGAACATACCTACGCCCATCATTTGCTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GACTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	60.443	99.685	0.603
comYH	Streptococcus mutans UA159	60.127	99.685	0.599